Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01776 ATGGAGCCAAAGTGCACCATTAACTGTCGCCGGTCGGAGGTCGTTCCGACCCCTCTGCCGGAGAGTCCTCGAGTGCCCATGGAGTTTCTGTCACGCTCATGGAGTGCCTCTGCTCTTGAGGTCTCCAAAGCTCTTTCACATCACCACTCTTCTCTCTCCTCTTCTTGCATGCCTAATACAAACACTTCCATTCCTGAAGAAACTGTTCCCAACAACAGCTTTCTCTCTGAAGATTTCTCCACTATGTCTAAGAATCAGTTCTCTTTTGCTTCCTCAGCCACCTCTCAGCTTGTCCTTGAACGCATTATGTCACAGTCCACAAGAGAGGAAGTGTCTCCGTTGACGTCGGGTAGATTATCTCATAGCAGCGAGCCTTTGAATGGCGGTGGTTCCTTAACCGGAACAGATAGCCCTCCGATTTCGCCTTCAGATGAGTTTGATGACGTTGTTAAGTTTTTTCGGGCAAATAATTCCATTCACCCTTTATTCAATGGTGGACGAGCCAGTGCAACTATTGGCAACGGCACAGCATGCTCAGGACCTAAAACTGTTGGAAGATGGTTAAAGGACCGAAGAGAGAAGAAGAAAGAAGAAAACAGAACCCATACTGCTCAGCTGCATGCCACTATTTCAGTGGCTGCAGTGGCTGCTGCCGTTGCAGCTATTGCGGCTGCGACAGCAGGCTCGTCTGCTCCCAGCAAGGATGAGAAGATGGCAAAGACTGACATGGCCGTTGCTTCCGCAGCCACATTAGTTGCTGCACAATGTGTAGAGGCTGCAGAAGCTATGGGAGCCGAGCGTGACCACCTTGCTTCTGTGGTCAGCTCTGCGGTGAATGTCCGTTCTCATGATGATATTACTACTCTTACAGCTGCAGCTGCCACAGCTCTACGAGGAGCAGCAACCTTGAAAGCAAGAGCTTTGAAGGAGGTATGGAATATAGCCACAGTGACACCACTAGAGCGAGGCATAGGGGGGATTGGACTATGTGGTAAAAGTAATAATAGCAATACTAGCAACACCAGCACCAGTGATAGCGGGGAAGTTTTCAATGGAGAAAATTTTCTAGGTGCCTGCAGCCAAGAGCTTATTGCCAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGGTGATCTTCACTGGAAAATAGTGTCTGTCTATATACATCGAACCGGCCAGGTAATGCTGAAAATGAAAAGCAGACATGTGGCAGGAACAATTACCAAAAAGAAAAAGAATGTTGTGCTAGATATTTGCACGGATTTACCAGCATGGCCAGGGAGACATCTGTTTGATGATGGTGAAAAGCGACGATACTTTGGATTGAAGACAGACCAAAGGGGGATTGTGGAGTTTGAGTGTCGAAATCAAAGAGAATATGACATCTGGACACAAGGGGTTTCGAGGCTACTCTCCATTGTAGCACAAAGGCAAAACAGATATGGGAATTGA 1452 0.478 MEPKCTINCRRSEVVPTPLPESPRVPMEFLSRSWSASALEVSKALSHHHSSLSSSCMPNTNTSIPEETVPNNSFLSEDFSTMSKNQFSFASSATSQLVLERIMSQSTREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASATIGNGTACSGPKTVGRWLKDRREKKKEENRTHTAQLHATISVAAVAAAVAAIAAATAGSSAPSKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIATVTPLERGIGGIGLCGKSNNSNTSNTSTSDSGEVFNGENFLGACSQELIAKGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDICTDLPAWPGRHLFDDGEKRRYFGLKTDQRGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNRYGN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01776 483 Pfam Plant pleckstrin homology-like region 369 474 IPR013666 -
Phco2g01776 483 MobiDBLite consensus disorder prediction 107 144 - -
Phco2g01776 483 MobiDBLite consensus disorder prediction 107 140 - -
Phco2g01776 483 Pfam Auxin canalisation 20 322 IPR008546 -
Phco2g01776 483 PANTHER EXPRESSED PROTEIN 15 475 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01776 Phco-Chr2 48287219 48290573 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01776 2 48287219 48290573 Phco2g01776 2 48287219 48290573 ECH
Phco2g01776 2 48287219 48290573 Phco6g00968 6 9460341 9464361 PCT