Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00965 ATGGATAGTGTAGATCACCAGCAGCAGCAGCAAGTAGAGGTTCCTCCACCTCAACCATTTTTGAAGTATCTAAAGTTCTCCTTGAAGGAGACTTTCTTCCCAGACGACCCTTTGAGACAGTTCAAAAACAAGCCACCCTCAAAAAAGTTCATGCTTGCTATTCAGTATTTCTTCCCCATCTTCCAATGGGCACCCAAATACACCTTCCACTTCTTCAAAGCTGACCTCATAGCTGGTATCACCATAGCTAGCTTGGCCATTCCCCAAGGCATCAGCTATGCCAAACTTGCCAACCTCCCTCCAATCCTCGGACTATATTCAAGCTTTATACCACCATTGATTTATGCCATGATGGGAAGCTCAAGGGATTTGGCGGTGGGGACTGTGGCGGTTGGATCTCTTCTGATGGGTTCTATGTTGAGTGATGAGGTTAATCCCAATGAAGATCCCAGACTTTACTTACACCTTGCCTTCACTGCTACATTATTTGCTGGAATTTTTCAGGCTGCTTTGGGTTTGTTTAGGTTGGGGTTGATAGTTGATTTTTTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCTACAGTGGTTTGTCTGCAGCAACTAAAATCGATTCTTGGCCTTGTGCATTTCACTCATGGAGCTGATATCATATCAGTTATGCGCTCTGTTTTCACCCAAATTGATCAGTGGAGGTGGGAAAGTTCTGTGTTAGGATTTGTCTTTCTTTTCTTTCTCCTGATCACTAGATACTTCAGCAAAAAACAACCAAGGTTTTTTTGGGTGTCAGCAATGGCGCCATTAACATCGGTTATCTTGGGAAGTCTGTTGGTTTATTTCACTCATGCCGAGAAGCATGGAGTTGAAGTGATAGGAGAATTGAAGAAGGGTTTAAATCCACCATCAGTCACAGAGCTGGTATTTGTGTCACCTTATTTGACCACAGCTGTCAAAACTGGCATTGTGGTTGGCATCATATCACTAGCAGAAGGAATAGCAGTGGGAAGGAGCTTTGCAATGTATAAAAATTACAATACTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACATCACAACAGGGCCGTTTTCACGCTCAGCTGTGAACTATAATGCTGGATGCAAGACAGCAGCATCCAACATTATCATGTCAATTGCAGTCATGTTGACATTGCTATTCCTAACACCCTTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCTATTATTGTGTCTGCAATGCTTGGCCTCATAGATTATCAAGCAGCCATCCATCTGTGGAAGATTGACAAATTTGACTTTGTTGTGTGCATGAGTGCATACATTGGCGTGGTCTTTGGCAGTGTTGAAATCGGCTTAGTCATAGCTGTTGCAATATCTGTACTTCGAGTACTTCTATTCATTGCAAGGCCAAGGACATTCGTTTTGGGAAACATTCCAAATTCTGGGATATACAGAAATGTTGAGCAATATCCAAATGCAAAACATGTTCCTGGAATCCTAATCCTAGACATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAAACAGAATCAAAGCTACTGGAGAGACAAGTTTGCAGTATGTTATAATGGATATGAGCGGTGTTGGAAACATTGATACAAGTGGAATAAGTATGCTTGAAGAGGTCAAGAAGATTACTGAGAGAAGAGAACTTCAACTTGTTTTGGTCAATCCTGGAGGCGAGGTGATGAAGAAACTGAACAAATCGAAGTTTCAAAATCATTTAGGACAGAGATGGATCTATCTAACTGTTGAAGAGGCCGTTGGAGCATGTAACTTCAATCTCCGTGCAAGAACGAATCTGAAGAAAGATGAATCAGAGGGTTGGAACAATGTTTAA 1944 0.4213 MDSVDHQQQQQVEVPPPQPFLKYLKFSLKETFFPDDPLRQFKNKPPSKKFMLAIQYFFPIFQWAPKYTFHFFKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSDEVNPNEDPRLYLHLAFTATLFAGIFQAALGLFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVHFTHGADIISVMRSVFTQIDQWRWESSVLGFVFLFFLLITRYFSKKQPRFFWVSAMAPLTSVILGSLLVYFTHAEKHGVEVIGELKKGLNPPSVTELVFVSPYLTTAVKTGIVVGIISLAEGIAVGRSFAMYKNYNTDGNKEMIAIGTMNIVGSFTSCYITTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRVLLFIARPRTFVLGNIPNSGIYRNVEQYPNAKHVPGILILDIDAPIYFANASYLRERITRWIDEEENRIKATGETSLQYVIMDMSGVGNIDTSGISMLEEVKKITERRELQLVLVNPGGEVMKKLNKSKFQNHLGQRWIYLTVEEAVGACNFNLRARTNLKKDESEGWNNV 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00965 647 Pfam STAS domain 504 622 IPR002645 -
Phco6g00965 647 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271|GO:0008272
Phco6g00965 647 Pfam Sulfate permease family 72 452 IPR011547 GO:0016020
Phco6g00965 647 SUPERFAMILY SpoIIaa-like 505 626 IPR036513 -
Phco6g00965 647 PANTHER SULFATE TRANSPORTER 25 629 IPR001902 GO:0016020|GO:0055085
Phco6g00965 647 FunFam Sulfate transporter 31 483 629 - -
Phco6g00965 647 NCBIfam sulfate permease 59 622 IPR001902 GO:0016020|GO:0055085
Phco6g00965 647 Gene3D STAS domain 483 629 IPR036513 -
Phco6g00965 647 ProSiteProfiles STAS domain profile. 503 626 IPR002645 -
Phco6g00965 647 CDD STAS_SulP_like_sulfate_transporter 504 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00965 Phco-Chr6 9416011 9423316 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00965 6 9416011 9423316 Phco6g00965 6 9416011 9423316 ECH
Phco2g01774 2 48231218 48237931 Phco6g00965 6 9416011 9423316 PCT