Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01774 ATGGGTAACGCAGACTATGCATACCCGAACGCTGACTGCGTGCACCGAGTGGCAATTCCACCCCCTCAACCATTCTTCAAGTCTCTCAAGTACTCCTTGAAAGAAACCTTTTTCCCGGATGACCCGTTTAGGAAGTTCAAGAACCAAACACCCTCTATCAAGTTCGTCCTTGGACTTCAGTACTTCTTCCCCATCTTTGAGTGGGCACCCAAATACACCCTCCAATTCTTGAAATCAGACCTCATCTCTGGCATCACCATTGCCAGTTTGGCCATTCCTCAAGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTTTATTCCAGCTTTATACCGCCTTTGATTTATGCTATGATGGGAAGCTCAAGGGACTTGGCAGTGGGAACTGTGGCTGTTGGATCACTTCTGATGGCTTCCATGTTGGGTCGAGTGGTGAACTACATCGAGAATCCAAACCTTTTTCTCCACCTAGCTTTCACTGCTACATTCTTTGCTGGAGTTTTGCAGGCATCTCTGGGCCTCTTCAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGGGGAGCAGCCACAGTGGTTTGTCTGCAACAGCTAAAATCAATACTTGGCCTTGAACATTTTACTCACGAGGCCGATTTAGTCTCAGTGATGCGCTCTGTTTTCACCCAAACCCATGAGTGGAGGTGGGAAAGCGCTGTGTTGGGTTGTTGCTTTATTTTCTTCCTCCTTGTCACAAGATACTTTAGCAAACGACAACCAAAGTTCTTCTGGGTGTCAGCAATGGCACCATTGGCGTCCGTCATACTGGGAAGTCTGCTGGTTTATCTCACACACGCTGAGAAGCATGGAGTTCAAGTGATAGGAAAATTGAAGAAGGGGCTGAATCCACCTTCCGTGACGAATTTGGTGTTGGTGTCACCTTACATGGGCACTGCCATAAAAACTGGTCTTGTCACTGGCATTATAGCACTTGCGGAAGGAATAGCAGTAGGTAGAAGCTTTTCAATGTTCAAAAATTATCATATTGATGGGAACAAAGAGATGATAGCTATTGGAACCATGAATATTTTTGGTTCGTTCACCTCTTGCTATCTCACCACAGGACCTTTTTCACGTTCAGCTGTGAACTATAATGCGGGGTGCAAGACTGCTGCATCGAACATTGTGATGGCAATAGCAGTGATGTTAACATTGTTATTCTTAACACCTTTGTTCCATTTCACTCCCCTGGTGGTGTTATCGGCCATAATTGTGTCAGCAATGCTCGGGCTCATTGATTATCAGGCAGCCATTCATTTGTGGAAAATCGACAAATTTGATTTCTTAGTGTGCTTCAGTGCTTATGTTGGTGTAGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGCAGTATCTCTACTTCGAGTGCTTCTATTTATTGCAAGGCCAAGAACATTTCTCTTAGGCAACATTCCAAATTCTGCAGTATACAGAAATGTGGAACAATATCCAAATGCAAATCATGTTCCTGGAATCCTAATTCTAGAAATTGATGCTCCCATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATGGATGAAGAGGAAGATAGGATAAAAGCTTCAGGGCAAACCAGTTTACAGTATGTTATAATGAATATGACTACTGTTGCAAACATTGATACTAGCGGAATAAGCATGCTTGAAGAATGCAAGAAAAGTGTTGACAGAAGAGGGTTACAACTTGTTTTGGTAAATCCTGGAAGCGAGGTGATGAAGAAGCTGAACAAATCCAAGTTCCTTGATGAACTAGGGCATAAATGGGTGTATCTGACAGTTGAAGAAGCTGTTGGTGCATGCAATTTCATGCTCAACACATACAAACCGAACCCCTTGAAGGATGATTCAGAAGGTTGGAACAATGCCTAA 1962 0.4388 MGNADYAYPNADCVHRVAIPPPQPFFKSLKYSLKETFFPDDPFRKFKNQTPSIKFVLGLQYFFPIFEWAPKYTLQFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGRVVNYIENPNLFLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFTQTHEWRWESAVLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLASVILGSLLVYLTHAEKHGVQVIGKLKKGLNPPSVTNLVLVSPYMGTAIKTGLVTGIIALAEGIAVGRSFSMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHFTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFSAYVGVVFGSVEIGLVIAVAVSLLRVLLFIARPRTFLLGNIPNSAVYRNVEQYPNANHVPGILILEIDAPIYFANASYLRERITRWMDEEEDRIKASGQTSLQYVIMNMTTVANIDTSGISMLEECKKSVDRRGLQLVLVNPGSEVMKKLNKSKFLDELGHKWVYLTVEEAVGACNFMLNTYKPNPLKDDSEGWNNA 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01774 653 ProSiteProfiles STAS domain profile. 508 631 IPR002645 -
Phco2g01774 653 PANTHER SULFATE TRANSPORTER 26 633 IPR001902 GO:0016020|GO:0055085
Phco2g01774 653 FunFam Sulfate transporter 31 488 634 - -
Phco2g01774 653 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
Phco2g01774 653 CDD STAS_SulP_like_sulfate_transporter 509 624 - -
Phco2g01774 653 Pfam STAS domain 509 627 IPR002645 -
Phco2g01774 653 SUPERFAMILY SpoIIaa-like 510 631 IPR036513 -
Phco2g01774 653 Gene3D STAS domain 488 633 IPR036513 -
Phco2g01774 653 NCBIfam sulfate permease 64 627 IPR001902 GO:0016020|GO:0055085
Phco2g01774 653 Pfam Sulfate permease family 77 457 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01774 Phco-Chr2 48231218 48237931 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01774 2 48231218 48237931 Phco2g01774 2 48231218 48237931 ECH
Phco2g01774 2 48231218 48237931 Phco6g00965 6 9416011 9423316 PCT