Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00964 ATGGCGACTTTGTCTCATGCAAACTCTAGGAGAATGTATTCATGGTGGTGGGACAGCCACATAAGCCCCAAAAACTCAAAATGGCTCCAGGAAAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCTTTTGCCAGGAGAGCAGAAATGTATTATAAAAAACGCCCAGAGCTTATGAAATTGGTTGAAGAGTTTTACCGGGCATATCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTTATCCGCCATGCCCATAGGACCATGACTGAGGCATTTCCTAATCAAGTTCCTATGATGCTGACAGATGATTTACCTACAGTTTCTCCTCTGGAGACAGAGCCACAGACTCCAGAAATGCACCACCCTTCACGTGCGTTTCTTGATCCAGATGAACCACAGAAGGAGGCTTCTGCTCAGTTCCATGTTATAAAAAAAAATGGTGGTTATTCTGGTGAACCTGATTCTTCCTTGAACAAAACAGGTTTGAAACAGCTCAATGATCTCTACATCCCTGGAGAACAAGAAAATCTTACACAGTTTGCAGAAAGGCATGCCAGAAGGGGGCTCAATTTTTTGGAGACACAGGAGAGTAGTGAGCTAAACAATGGAAGCAACATTACTAGGTCTCATGTCTCGTCTGAGTCTGAACGTGTGACAAAAGCTGAGGCAGAAATTTTGGCCTTGAAGAAAGCCATTGCCAAATTAGAAGATGAAAAGGAAGCTGGCTTGCTTCAGTATCAACAGTGTTTAGAGAAGTTGTCTAATCTCCAGTTAGAAGTGTCTAGTGCACAAGAGAATTCTCAAATACTTGATGAGAGAGCAAGTAAAGCTGAAGCTGAAGTTCAAGCCTTGAAGGAAACCCAAATTAAATTACAGGCTGGAAGTGAAGATAGTCTTCTTCAGTATCGGGAGTGCTTGGAAAAAATAGCAAAGCTAGAGGAGTGTATTTCTTTTACACAGACAGAAGCAGGAGAACATAATGAAAGAGCTACCAGAGCAGAAAATGAAGCCGAGTCCCTAAAGCAGGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGCTATCATTGTTCAATATAAACAGTGCTCAGAGTCATTATCAAAATTGGAGGAGAGATTAGAAGAAGCCAAGGAAAATGCAAGAATGGCTAAGGAGCATGCCAATATAGCTGAAAACGAAATTGGGGCTTTGAAACTAGAAGTTACTAAACTTAATGAAGAAAAGGAAGAAACTGCTCTCCGTTATCAGCAATGCTTGGAGATAATTTCCTGTCTGGAGCATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGCTAAATTCCAAGATAGATGATGGGGTTGAAAAATTGCAGAGTTCTGAACAGAAGTGTCTTCTCTTGGAGACATCAAATCACACTCTGCAGTCTGAGTTACAATCTTTGGCGCAGCAAATGGGGTCTCAAAGTGAAGAACTTACTGAGAAGCAGAAGGAATTGAGTAGACTTTGGGGTTGCATACAGGAGGAGAGATTGCGCTTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGCAGTTACATTCTCAATCTCAGGAAGAGCTTAGATCTCTTGCTGCTGAATTTCACAGTAAAGTGGATATACTGGGGTACGTTGAGTCACGTAAGCAGGCTTTAGAGGATGAAATACACAGGGTCAGTGAGGAAAACAAAATTCTAAATGAGGTCAAAATTTCTTCATCTTTGTCAATAACAAATTTGCAGGATGAGATTCTGAATTTGAGGGAGACAATAGAGAAACTTGAACAGGAGGTGGAGCTACGAATTGATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATTTGAATAAAAAACATGAAGCCATGATGGAGGAGGTGAGGTCAACTGACTTAGATCCACAGTGCTTTGGACCATCTGTGAAAAAATTACAAGATGAAAACTTAAAGCTGAAGGAAACATGTGAGGCTGACAAAGGAGAGAAAGAAGCGCTGTTGGTAAAATTGGAAACCATGGAGAAACTTCTGGAGAAAAATACTGTCTTGGAAAATTCCCTTTCAGACTTGAATGCTGAGCTGGATAGTGTCAGAGGAAAGGTAAATGTGCTGGAAGAAACATGTCAGTCTCTACTAGTGGAGAAATCCAATCTTGCTACTGAGAAGGCCAGCTTGTTTTCTCAGTTACAATCCACAACTGAAAAGCTGGAGAAGCTCTCAGAAAAGAGCAACCTATTGGAAAATTCATTATTTGATGTGAATGCTGAACTTGAAGGGTTAAGGATGAAGTCCAGGTCATTAGAAGATACATGCCAGTCACTTGACCATGAGAAGTCCAGTATCTTTGAAGAGAAAGAAACCTTAGTTTCACAGATGAACATAACTCATCAAACACTGAAAGATCTTGAGAAACTGCACAGTGAATTGGAATCAAAGCACTTGGAACTAAAAGGAGAAAGGGAGTCTGCACTTCAAAAGGTAGAAGAGCTTCTAGTTTCCCTATATTCTGAGAGGGAAGAGCATTCCAGAGTTTTGAAATTAAACGAAGATGAATTGGTTGAGAAGGAATTACAAATTCATATTCTACAAGAAGATGCCAATTGCAAGAAAAAGGAGTACGAGGAGGAATTGGACAGAGCTATACATTCTCAAATTGATATTTTCATCTTGCAGCAATGTATTGACGATCTGGAAAAAAAGAACTTCTCCATTCTGGTTGAGTGTCAGAGACTTTTGGAGGCTTCCAAAATGTCCGACAGAATGATATCTAAATTGGAGACTGAAAATGTTCAAAAGCAGGTTGATGTGAATTCTCTGTCTGAGAAAATTAAAATACTAAGGATTGGGTTGATTCAGGTGTTAAAGACTCTTGAAAATAACAGTGGGCATTTCTCTGAAGATATGCTTGAAGAAGACCAAATGCTTCTCAACCATACGTATGAAAAACTTCAGCAGAGGCAGAAATCTTTTGACACAATTTTCTATGAAGGCCAAAAAATGGCCATTGAGAATTCAATTCTGGTTACATTCCTTGAGCAGTTGAAACTAAAGGTAGAAAATCTTGTGATACAAAGAGATGCCCTTGATGAGCAGTTCAGTATCCAGTCTCAGCAGTTCTTGGCATTGCAAATAGAGGTCCAAAAGATACTGGAGAAGAACCAAGAGTTGAAGTCGACAATAAGCAAAGGAGAAGAGAGAATGGAAGTAATGACAACTGAAATAAGCAACCTACAGAATAAACTCTCAGACATGGAAAAGAATCACAACAATTTACAGGAGGATAGTTGCAAAATATTGGAAGAGAAGAAGTCCTTGATGAGAAGTTTTATGGATCTGGGTGAAGTGAAAAGTGAATTGGAAGAAGAAATATGTTTCATGATCCATGAGACAATAACTCAGTCTAATATTTCCCTGATTTACGAAAATGTTATCTTTGAAAAGCTCCTGGAACTTAAAGAGCTAGGTGAGGATCTTGATAACCATTGTTCAGCAAATAATGACCTCGAGGAGAGATTAAAAGTTGTGGTGGGAAAGTTAGAGAATGCAGAAATGGAAAATTCACATCTTAAAGAGTCATTTGTAAAGTCAAATGTTGAACTGCAGGTAGTTGAATCTCTCAATGATGAATTAAGTTGTCAGATTAGGGATGAAAGGGAAATGTTAAATCACAAGGAAAATGAGCTTTTGGAAGCAGCTGAGATGTTTCATGTTTTACATTCTGAGAAAACAGAATTGCAAAGAATGGTGGAAGATCTGAAGATTAAGTATGATGAGGCAAGGGCGATGCTCGAAGAACAGGCTAATAAAATTTTGAAATTGTCCTCAGACAAGGACCATCAAAATGAAGAGTTAATAGGCTTGTGTGAAGTTAACCAGAAGTTGGAGTCTGAAATGGGGTACCTACGTCAAGAGCTTGGAGAAACTAAACTGAGGGAAAAGAAGCTAAGTTATGAAGTACTTAAGGGAACAAATGAGATTGAACAATGGGAAACTCAGGCTTCAACACTCTTTGCTGAGCTGCAAATTTCTGCTGTCAATGGAACATTATTGGAAGGAAAGGTCTCTGAGCTAGCTGATGCTTGTAAGAATCTTGAACTCAGAAACTACTCTAAAGAGATTGAGAGTGAGCATCTGAAAGAAAGAGTTAGCAAGCTGGAAATTGAAAATGGAAGACTATCCGGTCAATTAGCTGCATATGTCCCTGCTGCCAGTGCCTTGAATGATTCTATAACAACTCTGGAGATGCAGACTCTTGCACATGCAAAACCTGATGACGGTGAAGAAACAAAGGTTAAAATATTGGTCAGTAATGAATTCACTGAAAACGATCAACAAACAGATGAAGACAAGACTGTTATGGCACCAGATGCACTCCCTGCCTTCCAAGACATGCAGAGAAGAATCAATGCTATTGCAATGCTAGTAAAGCAGTTAAATGAAAGTTTCAAACTCAAGAATGAAACGAGAGAGATTCAAGAGTTAAAATCTGGAATTGCCCGGCATGAAGAGAATATTCAAGCAAGCAAGCATGTTACTCAAGACCAAGGAAAGTCATATATCCCGGTTACCGAGATTGAAGTTTTGCCAAAAGACATCATGCTAGATCAAATATCTGAATGTTCATCGTATGGGATAAGTAGGAGGAGAGAAATTCTTGAGGCTGATGATCAGATGCTTGAGATGTGGGAAACAGAAGATAAGGATGGCACTATTGGAAAGCAAGTTGAAAAGACACAAAGGATGGCTTCTTCTGAAGCTGCTGGCAATCATCAAAGAGGAACAACCAAGGAACCCAAAAATAAATATCCTTCAAAAGATTCCTTGGTGGAAAAAGAGTTGAGTGTGGACAAGTTAGAGATCTCAAGAAGATTGACACTGCCCCGGGAAGAAGGGAACCAAACGAAGACTTTAGAGAGACTTGATTCTGATGCACAGAAGTTGACAAACCTTCAAATCACCATACAAGATTTGATTAAGAAGGTAGATGTTAATGAGAAGAACACAAAGGGAAAAGGCGTTGAGTTTGATGAGGCGAAAGGGCAGCTTGAAGCATCCCAGGAGACCATCACAAAGTTGTTTGACGCCAACCGGAAGTTGATGAAGAATGTGGAAGAGGATACCTTGTCTTCTGCGGGGAAGAGTGGAGGAGAGTCAGATGAAAGTGGAAGTGTGAGCAGAAGGAGAGTCTCAGACCAGGCACGGAGAGAATCAGAAAAGATAGGACAACTGCATTTGGAGGTGCAAAGACTGCAGTTTCTACTTCTGAAACTTGGTGATGGAAAAGAAAGCAAAGAGAAAACAAAAACGACTGATCGAAGTCCAAGAGTGCTTTTGCGAGATTATCTCTATGGAGGGACGAGAAGCAACAACCCAAAGAAGAAAAAGCTACCTTTTTGTTCATGTGTGCGACCTCCCACCAAGGGAGATTGA 5475 0.4004 MATLSHANSRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRHAHRTMTEAFPNQVPMMLTDDLPTVSPLETEPQTPEMHHPSRAFLDPDEPQKEASAQFHVIKKNGGYSGEPDSSLNKTGLKQLNDLYIPGEQENLTQFAERHARRGLNFLETQESSELNNGSNITRSHVSSESERVTKAEAEILALKKAIAKLEDEKEAGLLQYQQCLEKLSNLQLEVSSAQENSQILDERASKAEAEVQALKETQIKLQAGSEDSLLQYRECLEKIAKLEECISFTQTEAGEHNERATRAENEAESLKQDLARVEAEKEAIIVQYKQCSESLSKLEERLEEAKENARMAKEHANIAENEIGALKLEVTKLNEEKEETALRYQQCLEIISCLEHKLSCAEEEVRRLNSKIDDGVEKLQSSEQKCLLLETSNHTLQSELQSLAQQMGSQSEELTEKQKELSRLWGCIQEERLRFIEAETAFQTLQQLHSQSQEELRSLAAEFHSKVDILGYVESRKQALEDEIHRVSEENKILNEVKISSSLSITNLQDEILNLRETIEKLEQEVELRIDERNALQQEIYCLKEELNDLNKKHEAMMEEVRSTDLDPQCFGPSVKKLQDENLKLKETCEADKGEKEALLVKLETMEKLLEKNTVLENSLSDLNAELDSVRGKVNVLEETCQSLLVEKSNLATEKASLFSQLQSTTEKLEKLSEKSNLLENSLFDVNAELEGLRMKSRSLEDTCQSLDHEKSSIFEEKETLVSQMNITHQTLKDLEKLHSELESKHLELKGERESALQKVEELLVSLYSEREEHSRVLKLNEDELVEKELQIHILQEDANCKKKEYEEELDRAIHSQIDIFILQQCIDDLEKKNFSILVECQRLLEASKMSDRMISKLETENVQKQVDVNSLSEKIKILRIGLIQVLKTLENNSGHFSEDMLEEDQMLLNHTYEKLQQRQKSFDTIFYEGQKMAIENSILVTFLEQLKLKVENLVIQRDALDEQFSIQSQQFLALQIEVQKILEKNQELKSTISKGEERMEVMTTEISNLQNKLSDMEKNHNNLQEDSCKILEEKKSLMRSFMDLGEVKSELEEEICFMIHETITQSNISLIYENVIFEKLLELKELGEDLDNHCSANNDLEERLKVVVGKLENAEMENSHLKESFVKSNVELQVVESLNDELSCQIRDEREMLNHKENELLEAAEMFHVLHSEKTELQRMVEDLKIKYDEARAMLEEQANKILKLSSDKDHQNEELIGLCEVNQKLESEMGYLRQELGETKLREKKLSYEVLKGTNEIEQWETQASTLFAELQISAVNGTLLEGKVSELADACKNLELRNYSKEIESEHLKERVSKLEIENGRLSGQLAAYVPAASALNDSITTLEMQTLAHAKPDDGEETKVKILVSNEFTENDQQTDEDKTVMAPDALPAFQDMQRRINAIAMLVKQLNESFKLKNETREIQELKSGIARHEENIQASKHVTQDQGKSYIPVTEIEVLPKDIMLDQISECSSYGISRRREILEADDQMLEMWETEDKDGTIGKQVEKTQRMASSEAAGNHQRGTTKEPKNKYPSKDSLVEKELSVDKLEISRRLTLPREEGNQTKTLERLDSDAQKLTNLQITIQDLIKKVDVNEKNTKGKGVEFDEAKGQLEASQETITKLFDANRKLMKNVEEDTLSSAGKSGGESDESGSVSRRRVSDQARRESEKIGQLHLEVQRLQFLLLKLGDGKESKEKTKTTDRSPRVLLRDYLYGGTRSNNPKKKKLPFCSCVRPPTKGD 1824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00964 1824 MobiDBLite consensus disorder prediction 1585 1623 - -
Phco6g00964 1824 Coils Coil 1166 1200 - -
Phco6g00964 1824 Coils Coil 524 544 - -
Phco6g00964 1824 Gene3D - 682 864 - -
Phco6g00964 1824 Coils Coil 657 677 - -
Phco6g00964 1824 MobiDBLite consensus disorder prediction 1776 1790 - -
Phco6g00964 1824 Coils Coil 807 841 - -
Phco6g00964 1824 Coils Coil 737 792 - -
Phco6g00964 1824 MobiDBLite consensus disorder prediction 1776 1824 - -
Phco6g00964 1824 SUPERFAMILY Tropomyosin 421 646 - -
Phco6g00964 1824 Coils Coil 860 898 - -
Phco6g00964 1824 Coils Coil 1061 1109 - -
Phco6g00964 1824 Coils Coil 258 299 - -
Phco6g00964 1824 PANTHER PROTEIN NETWORKED 4A 395 1054 - -
Phco6g00964 1824 Coils Coil 335 425 - -
Phco6g00964 1824 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Phco6g00964 1824 SUPERFAMILY Tropomyosin 219 422 - -
Phco6g00964 1824 Coils Coil 937 957 - -
Phco6g00964 1824 MobiDBLite consensus disorder prediction 1607 1623 - -
Phco6g00964 1824 Coils Coil 1026 1046 - -
Phco6g00964 1824 Coils Coil 587 646 - -
Phco6g00964 1824 Coils Coil 1257 1298 - -
Phco6g00964 1824 Coils Coil 230 250 - -
Phco6g00964 1824 Coils Coil 1222 1249 - -
Phco6g00964 1824 Coils Coil 688 722 - -
Phco6g00964 1824 Coils Coil 433 467 - -
Phco6g00964 1824 MobiDBLite consensus disorder prediction 1591 1606 - -
Phco6g00964 1824 MobiDBLite consensus disorder prediction 1735 1755 - -
Phco6g00964 1824 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Phco6g00964 1824 MobiDBLite consensus disorder prediction 1721 1755 - -
Phco6g00964 1824 Coils Coil 1499 1519 - -
Phco6g00964 1824 Coils Coil 475 502 - -
Phco6g00964 1824 Coils Coil 559 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00964 Phco-Chr6 9408328 9415150 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00964 6 9408328 9415150 Phco6g00964 6 9408328 9415150 ECH
Phco2g01772 2 48216163 48222509 Phco6g00964 6 9408328 9415150 PCT