Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01772 ATGGCGGCTCTGTCCCATGCTGATTCTAGAAGAATGTATTCATGGTGGTGGGACAGTCACATTAGCCCCAAGAACTCGAAATGGCTCCAAGAGAATCTGACAGATATGGATTCCAAGGTGAAGCAAATGATCAAGGTTATTGAAGAAGATGCAGATTCCTTTGCCAGGAGGGCAGAAATGTATTATAAGAAACGGCCAGAGCTTATGAAATTAGTTGAAGAGTTTTATCGTGCATACCGGGCATTGGCTGAGAGATATGATCATGCCACTGGAGTGATTCGTCAGGCCCATCGTACCATGGCTGAAGCATTTCCTAATCAAGTGCCTCCTGCAGCAGATGATTCATCCGGTGTTTCTTACATGGAGACTGAGCCACATACACCAGAGACACTCGGCTTCTCCCGTTCATTTCTTGACTCAGATGAATTGCAAAAGAATGCTTCAACTCATTTCCATACCATCAAAAGAAATGGATCTTATACTGATGAAACTGATTGTGGTATAAGCAGAAAGGGTTTGAAACAGCTCAATGATCTATTTATGTCAGGAGAACCAGTCAGTGGGCGTGTTCGAAGGGGGCTCAATTTTCTTGACATAGAAGAGATTAATGGGCAAGACAATGGAAGCCAAGATAGTAGGACTGAAGTATTATCAGAGTCTGAACGGATGACCAAAGCTGAGACAGAAATTTTGGCCTTAAAGAAAGCCCTGTCTAACTTAGAAAGTGAAAAGGAGGCTGGCTTGCTTCAGTATCAACAGAGTTTGGAGAGATTGTCTAATCTGGAATCAGAAATGTCTCGTGCAAGAGAGAATTCTCACGGACTTGATGAACGAGCAAACAAAGCTGAAGCTGAAGTTCAAACCTTGAAGGAAGCCCTTGATGATTTACAGGCTGAAAGAGAAGTTAGTCTTCTTCAGTATCAGCAATGCTTGGAGAATATATATAATCTGGAGAAAAATATTTGCTCTGCTCAAAAGGATGTAGGAGAACTCAATGAACGAGCTACTAGAGCTGAAACTAAAGCTGAATCCTTAAAGGAAGACCTTGCTAGAGTAGAAGCTCAAAAGGAAGCTGCCCTTGCTCAATATAACCAGTCCTTGGAGTTGTTGTCAAAAGTAGAGGAGAGGCTCGTACAAGCTGAAGAGAACGCAAGAAGAATTAAAGAACAAGCTAATGATGCAAAAACTGAAATTGAGAGCATGAAGTTAGAAATTGCTAAACTTACTGAAGAGAAGGAAGATGCAGCTCACTGTTATCAACAATGCTTAGAGATAATTTCCAGTTTGGAGCATAAACTCTCTTGTGCCCAAGAGGAGGTGCATAAGCTAAATTGCAAGATAAATGATGGGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTTTTCTCTTGGAAACATCTAATCAGACTTTGCAATCTGAATTGCAGTCTTTGGCACAGAAGTTGGGATCTCAGAGTGAAGAACTTAGTGAGAAGCAGAAAGAATTGGGTAGACTCTGGACTTGTATACAAGAGGAGAGATTGCGACTCATCGAGGCTGAAGCTGCTTTCCAAACTCTTCAGAATTTGCATTCTCAATCTCAAGAAGAACTAAGATCTCTTGCCACCGAGCTTCATGGTAAGGCTGAAATTCTGGAGAATATGGAATCCCATAAGCAGGCTTTAGAGGAAGAAGCACACAAGGCCAAAGAAGAAAACAAAACTCTAAATGAGCTCAAATTATCTTCATCTTTGTCTATAAAAAAAATGAAGGATGAGATATTAAATCTGAGGGAGATAATAAAGAAACTTGAACTGGAGGTTGGACTGCAGGTAGATGAAAGAAATGCTCTCCAGCAAGAAATTTACTATCTTAAAGAGGAGCTTAATGATGTGAATAAAAGACATGAATCCATGATGGAGGATGTCAGATCAACTGACTTAGATCCACAGTGCTTTGCCTTTTCTGTGAAGAATTTGCAAGATGAGAATTCAAAGCTGAAGGAAAGATGTGAAACCTACAAAGATGAGAAAGCAGCTCTAAAGGAAAAAGTGGAGATCTTGGAGAAGCTTTTGGAGAAGAATGCTGTTTTGGAGAGGTCTCTTTCAGATTTGACTGTAGAGCTTGAGAAGGCCAGAGGAAAGGTAAAGGTATTGGAAGAAACTTGCGAATCTTTTCTTCGGGAGAAATCCACTCTTGCTGATGAAAAAGCGACCTTGTTTTCTCAGTTACAAACCACAGCTAAGCAGCTGGAGAAGCTCTCAGAGAAAAACAACCTTTTAGAAAGTTCACTGTGTGATGTGAATGCTGAGCTTGAAGGATTAAGAATAAAGTCAAAGATCTTAGAAGACTCTTGTCTGTTGCTAGACCATGAGAGGTCCAGTATCAACTCTGAGAAAGAAACCTTAGTTTCACAATTCAACATCACTCATCAAACTCTGAAAGATCTTGGGAAACAACACAGTGAATTGGAACTGAAGCATTCTGAACTGAAAGCAGAAAGGGAATCTGCACTTCACAAATTGGAAGAGCTACTTGTTTCTTTATATGCTGAGAGGGAAGAACATTCCAGAATTGTGCAATTGAATGAATGTCACTTGGCTGAGAAGGAATTGCAAATTTTTGTTCTCCAAGACGATGTAGATTACCAGAGAAAGGAATATGAAGAGGAAATGGACAGATCTGTACATGCTCAAATGGAAATTTTCATCTTGCAGAGATGTATCCAGGCTTTGGAGCAAAAGAACTTCTCCCTTCTAGTTGAGTGTCAGAGACTCTTGGAGGCTTCTAAACTGTCTGATAGATTGATATCTAAATTGGAGAATGACAACACTCAGAAGCAAGTTGATGTTAATTCACTGTCTGAGAAAATTAAAATACTCAGGATCGGACTGCTTCAGGTGTTGAAGACTCTTGATATTAACAGCGAGCCTTGGTGTGAAAATATGATTGAAATGGACCAGGAGCTTCTGAACCATATACATGGTAAACTTCAGGAGACACAAAGTTCTTTTGTCACAATTTTCAATGAAAGCCAGCAAGTGGCCATTGAGAATTCAGTTCTTGTTACATTCCTTGGCCAGTTGAAGTTAAAGGCTGAAAATCTTTTGACGGAAAGAAATTCCCTAGATAAGGAGTTGAGAACCCAGTCTACAGAGTTTTTGGCATTGCAGGCAGAGGTACAAAAGATATTGGAGAAGAATCAGGAATTGAAGTCGACAATAAGGAAAGGAGAAGATAAAATGGAACTAATGGCTACTGAAGTAGAGAATTTATGCAAACAGCTGTTAGACTTGAAAGAGGATCTCCAAAACATAAAGGAAGAAAATTGCAAAACTTTTGAAGAGAAAAATTCCTTGATGGGAAGATTTCTGGACCTGGGTGAAGAGAAAAGTAAGTTGGAAGATGAAATCTGCATTATGATTGATGAGACAATAACACAATCTAATCTCTCGCTGGTCTACCAGAACATTGTATTCGAAAAACTCCTGGCACTTACAGGGCTAAGCAACGATTTCGATAGACTTTGTTCAGTAAATACCGACCTTGAGGAGAAACTAAAAATACTGATGGGCAAAATAGAAGATGTACAAATGGAAAATTCCGATCTTAAAGAGTCCTTTGCAGTGTCAAGCATCGAACTAAAATTAGTTCAATCCGTCAATGATCAATTAAATTGTCAGATTAGGAATGGAAAGCAATTGTTGTCTCAAAAGGAAAATGAGATTTTGGAAGCAGCAGAGATGTTTAGCGCTTTACATGATAAGAAAACAGAATTGCAAAGATTGGTGGAGGTTCTGAAGAGCAAGTATGATGAAGCCAGGGTGATACTTGAAGACCAAGCTAGTCAAATTTTAAAATTATCCTCCGAAAAGGATCAACAAAATGATGAGTTTGGATGCCTCGGTAAGGTGAATCAGAAGTTGGAGGAGGAAATGAGGCACCTGCACCAAGAAATTGGAGAAATTAAACTGAGGGAAGAGAAGCTAAGTCATGAACTACTTAAGGGAACAAATGAGATTAAACAATGGGAAACTCAGGCTGCCACACTCTATACCAGACTGCAGATTTCTGCCGTCAATGAGACATTATATGAAGAGAAGGTCCGTGAGCTAGCTGGTGCATGTGAAGATCTTGAACGCAGAAGCAAATTTAAAGACATGGAAAGTGAAATGCTGAAAGAAAGAGTTTACAAGTTGGAAGGTGACAATGGGAAGCTTCGGGTTCAGTTGGCTGCTTATGTCCCGGCTGCCAGTGCTTTGAATGACTGCATAACATCCTTGGAGATGCAAACACTTGGGCATGCAAATCCACATGACGAAAAAGTATCAAAGGTTAAAGATTTCGCATATCACAAATACAATGAAGGTGGTCCACAAACAGGTGAGGATCAGAATGCTGCGGCAATAGATGCACTTCCAGATTTCCAAGGCATGCAGAAAAGAGTCAATGCGATTGAAACGGCTGTTAAACAGATGAATGAAAGTTTCAAAACTAAGGATGAAATGAGAGAGATTCAAGTGTTAAAATCTGGATTCAGCCGGCGCCAGGGAAGTATTCAAGCAAGTAAGTATGTTACTGAAATGCATGAAGCGAAGGGGCATCGAGGTGGAGCTTCTGATGAACTGAAGTCAAAAAGATCAGTGTCAGATGTCCCTGTAGCAGAAATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAACGTCTGAATGTTCATATGGGATAGGTAGGAGAGGAACTCTTGAGACTGATGATCAGATGCTCGAATTGTGGGAAACTGCTAATAAGGATGGCGTTATTGGGCTCACAGTTGGAAAGGCGCAGAAGACAGCCATTGTGCCTACTGGATACCATCAAAAGAGAGCAACCAAGGAGCTCAGAAACAAATATCCGTCAGTGGAGTCCTTGATTGAGAAGGAGTTGAGTGTGGACAAATTAGAGGTCTCAAGAAGATTGACACGGTCACATTCACACGAAGAAGGCAACAGGAGGAAGATTTTAGAAAGACTTGATTCTGATGCTCAAAAGTTGACAAACCTTGAAATTACCGTGCAAGATTTGATGAGCAAGGTAGAAATCACTGAGAGCACAAAGGGAAAAGGTATTGAGTTCGATACGGTGAAAGGGCAGCTTGAAACTACCCAGGAAGCCATCACAAAGTTGTTTGATGCTAACAACAAGTTGAAGAAGAATATAGAAGAGGGTACTTCATCCTTTGTTGGGAAGTATACAGCAGAATCAAATGAGAGTGGAAGTGGTAGCAGGAGAGTTTCAGAACAGGCTCGGAGAGGGTCTGAAAAGATAGGACGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTTTACTTCTAAAGTTGAATGATGAAAAAGAAGGCAAAGGAAAGGCAATGATAGATGAACGAAATTCAAAAGTTCTTTTGCGAGATTATCTCTATGATGGGACGAGAAGAAACTACCAGAAAAAGAAGAAGAAAGCACACTTTTGTGCATGCATGCAGCCTCCCACAAAGGGAGATTAA 5499 0.4037 MAALSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKVIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPPAADDSSGVSYMETEPHTPETLGFSRSFLDSDELQKNASTHFHTIKRNGSYTDETDCGISRKGLKQLNDLFMSGEPVSGRVRRGLNFLDIEEINGQDNGSQDSRTEVLSESERMTKAETEILALKKALSNLESEKEAGLLQYQQSLERLSNLESEMSRARENSHGLDERANKAEAEVQTLKEALDDLQAEREVSLLQYQQCLENIYNLEKNICSAQKDVGELNERATRAETKAESLKEDLARVEAQKEAALAQYNQSLELLSKVEERLVQAEENARRIKEQANDAKTEIESMKLEIAKLTEEKEDAAHCYQQCLEIISSLEHKLSCAQEEVHKLNCKINDGVEKLHSSEQKCFLLETSNQTLQSELQSLAQKLGSQSEELSEKQKELGRLWTCIQEERLRLIEAEAAFQTLQNLHSQSQEELRSLATELHGKAEILENMESHKQALEEEAHKAKEENKTLNELKLSSSLSIKKMKDEILNLREIIKKLELEVGLQVDERNALQQEIYYLKEELNDVNKRHESMMEDVRSTDLDPQCFAFSVKNLQDENSKLKERCETYKDEKAALKEKVEILEKLLEKNAVLERSLSDLTVELEKARGKVKVLEETCESFLREKSTLADEKATLFSQLQTTAKQLEKLSEKNNLLESSLCDVNAELEGLRIKSKILEDSCLLLDHERSSINSEKETLVSQFNITHQTLKDLGKQHSELELKHSELKAERESALHKLEELLVSLYAEREEHSRIVQLNECHLAEKELQIFVLQDDVDYQRKEYEEEMDRSVHAQMEIFILQRCIQALEQKNFSLLVECQRLLEASKLSDRLISKLENDNTQKQVDVNSLSEKIKILRIGLLQVLKTLDINSEPWCENMIEMDQELLNHIHGKLQETQSSFVTIFNESQQVAIENSVLVTFLGQLKLKAENLLTERNSLDKELRTQSTEFLALQAEVQKILEKNQELKSTIRKGEDKMELMATEVENLCKQLLDLKEDLQNIKEENCKTFEEKNSLMGRFLDLGEEKSKLEDEICIMIDETITQSNLSLVYQNIVFEKLLALTGLSNDFDRLCSVNTDLEEKLKILMGKIEDVQMENSDLKESFAVSSIELKLVQSVNDQLNCQIRNGKQLLSQKENEILEAAEMFSALHDKKTELQRLVEVLKSKYDEARVILEDQASQILKLSSEKDQQNDEFGCLGKVNQKLEEEMRHLHQEIGEIKLREEKLSHELLKGTNEIKQWETQAATLYTRLQISAVNETLYEEKVRELAGACEDLERRSKFKDMESEMLKERVYKLEGDNGKLRVQLAAYVPAASALNDCITSLEMQTLGHANPHDEKVSKVKDFAYHKYNEGGPQTGEDQNAAAIDALPDFQGMQKRVNAIETAVKQMNESFKTKDEMREIQVLKSGFSRRQGSIQASKYVTEMHEAKGHRGGASDELKSKRSVSDVPVAEIEVLPKDIMLDQTSECSYGIGRRGTLETDDQMLELWETANKDGVIGLTVGKAQKTAIVPTGYHQKRATKELRNKYPSVESLIEKELSVDKLEVSRRLTRSHSHEEGNRRKILERLDSDAQKLTNLEITVQDLMSKVEITESTKGKGIEFDTVKGQLETTQEAITKLFDANNKLKKNIEEGTSSFVGKYTAESNESGSGSRRVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDEKEGKGKAMIDERNSKVLLRDYLYDGTRRNYQKKKKKAHFCACMQPPTKGD 1832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01772 1832 Coils Coil 1762 1782 - -
Phco2g01772 1832 MobiDBLite consensus disorder prediction 1737 1760 - -
Phco2g01772 1832 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Phco2g01772 1832 Coils Coil 737 757 - -
Phco2g01772 1832 Gene3D - 221 393 - -
Phco2g01772 1832 Coils Coil 580 639 - -
Phco2g01772 1832 Coils Coil 1173 1200 - -
Phco2g01772 1832 Coils Coil 223 243 - -
Phco2g01772 1832 Coils Coil 426 446 - -
Phco2g01772 1832 Coils Coil 468 495 - -
Phco2g01772 1832 Coils Coil 650 722 - -
Phco2g01772 1832 Coils Coil 538 575 - -
Phco2g01772 1832 Coils Coil 1271 1291 - -
Phco2g01772 1832 MobiDBLite consensus disorder prediction 106 131 - -
Phco2g01772 1832 Coils Coil 503 530 - -
Phco2g01772 1832 PANTHER PROTEIN NETWORKED 4A 277 381 - -
Phco2g01772 1832 Coils Coil 328 418 - -
Phco2g01772 1832 Coils Coil 251 306 - -
Phco2g01772 1832 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Phco2g01772 1832 Coils Coil 1215 1235 - -
Phco2g01772 1832 Coils Coil 930 950 - -
Phco2g01772 1832 SUPERFAMILY Tropomyosin 232 496 - -
Phco2g01772 1832 Coils Coil 807 834 - -
Phco2g01772 1832 Coils Coil 1355 1375 - -
Phco2g01772 1832 MobiDBLite consensus disorder prediction 1737 1752 - -
Phco2g01772 1832 Coils Coil 1019 1102 - -
Phco2g01772 1832 Coils Coil 1299 1319 - -
Phco2g01772 1832 Coils Coil 1705 1725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01772 Phco-Chr2 48216163 48222509 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01772 2 48216163 48222509 Phco2g01772 2 48216163 48222509 ECH
Phco2g01772 2 48216163 48222509 Phco6g00964 6 9408328 9415150 PCT