Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00958 ATGGCTTTTAGAGGCTTTGTCTTGTTTCTAGTTACGGCTATGGTGGCCACTATGTGGACTCAAAATGCTACTGCCCAATCAGGTTGCACCAATACACTCACTAGCTTGAGCCCTTGCCTCAACTACATAATGGGGAGTTCTTCAACCCCATCAGCTTCATGTTGCTCACAGCTCTCAACTGTTGTCCAATCTTCACCACAGTGCCTTTGCTCCCTTCTTAATGGTGGCTCCACTTTCGGAATTACCATTAATCAAACTCTTGCTTTGTCTCTCCCTGGCGCTTGTAAAGTGCAAACTCCCCCAGTTAGCCAGTGTCAAGCTGGCAATGGACCAACATCTCCTTCGACTGCTCCAGTTGGTTCTCCTTCTGATTCTTCAGCTGAATCACCTCAAGGGTCATTATCACCTGCTTCAGACTTTCCCTCAGGTGCAGGATCTAAAACGGTGCCATCAACAAATGGTGGTTCATCTGATGGAAATGCTATTGAAGTCCCCTCCCACTTGGCGTTCTATCTTCTTGCCATTGTGTCGTGTGCCTTAACCTTCACCAAGTTCTGA 558 0.4731 MAFRGFVLFLVTAMVATMWTQNATAQSGCTNTLTSLSPCLNYIMGSSSTPSASCCSQLSTVVQSSPQCLCSLLNGGSTFGITINQTLALSLPGACKVQTPPVSQCQAGNGPTSPSTAPVGSPSDSSAESPQGSLSPASDFPSGAGSKTVPSTNGGSSDGNAIEVPSHLAFYLLAIVSCALTFTKF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00958 185 Gene3D - 26 105 IPR036312 -
Phco6g00958 185 MobiDBLite consensus disorder prediction 105 158 - -
Phco6g00958 185 SMART aai_6 29 105 IPR016140 -
Phco6g00958 185 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 26 104 - -
Phco6g00958 185 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Phco6g00958 185 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869|GO:0008289
Phco6g00958 185 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Phco6g00958 185 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 157 IPR043325 -
Phco6g00958 185 CDD AAI_LTSS 36 97 - -
Phco6g00958 185 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 106 IPR036312 -
Phco6g00958 185 Pfam Probable lipid transfer 11 105 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00958 Phco-Chr6 9322099 9323086 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00958 6 9322099 9323086 Phco6g00958 6 9322099 9323086 ECH
Phco6g00958 6 9322099 9323086 Phco2g01766 2 48163628 48164902 PCT