Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01766 ATGGCACCCAGAAGGATTGAGATGCTGCTGAGCCTGTCCCTTGTGGTGGCTCTTTCTGGTGCCACATTGGCTCAATCTCAATCAAGTTGCACCAATGTGTTCATAAGTCTTGCTCCCTGCCTTGACTATGTAACAGGAAATGCTTCTACCCCTTCCTCTTCTTGCTGCTCTCAACTTGCCTATGTAGTGAGTTCACAGCCAATGTGCCTTTGTGAGGTTGTTAACGGTGGTGCTTCATCTATTGCTGCAAGTTTCAACATCAATCAGACCCGGGCTTTGGCTCTCCCCACTTCTTGCAACATTCAGACACCTCCCCTTAGCACCTGCACTGGCTCAGATTCTTCCTCACCAGCTCTTTCGGTTTCAAACTTTCCCAGCTCCCCTTCAGGGATTGGATCTAACACTGTTTCATCAACTACTGGAGGTAGTAGAAGTGTCGGTGGTTCAGCTCATGGAAATTCAAGTTCCACAACTAATTTATCATGCTCTTGGTTTCTCGTGTTTGTCCTTGCAACCACTTTGACTTTCACCTTCAAGAGTACGACCTAG 549 0.4736 MAPRRIEMLLSLSLVVALSGATLAQSQSSCTNVFISLAPCLDYVTGNASTPSSSCCSQLAYVVSSQPMCLCEVVNGGASSIAASFNINQTRALALPTSCNIQTPPLSTCTGSDSSSPALSVSNFPSSPSGIGSNTVSSTTGGSRSVGGSAHGNSSSTTNLSCSWFLVFVLATTLTFTFKSTT 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01766 182 Gene3D - 27 107 IPR036312 -
Phco2g01766 182 MobiDBLite consensus disorder prediction 119 157 - -
Phco2g01766 182 SMART aai_6 30 109 IPR016140 -
Phco2g01766 182 CDD AAI_LTSS 37 101 - -
Phco2g01766 182 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
Phco2g01766 182 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Phco2g01766 182 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Phco2g01766 182 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 14 153 IPR043325 -
Phco2g01766 182 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 110 IPR036312 -
Phco2g01766 182 Pfam Probable lipid transfer 12 109 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01766 Phco-Chr2 48163628 48164902 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01766 2 48163628 48164902 Phco2g01766 2 48163628 48164902 ECH
Phco6g00958 6 9322099 9323086 Phco2g01766 2 48163628 48164902 PCT