Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00951 ATGAGAGAGGGGCTGAGATCGCGGGCGCGATTGGGGACGGTTTCTGGAGGCGAAGGAGTTGTTCACAAAAAAAAGGTTGTTGTGAAGAGCGAGGCTGTTGACTTGGATGGCGAGGGTTTGGAGGTGCAGAACTCAACGATTGAGAAGAAGGATGAAGCTGCACGTGATGTTAAAGAAGAATGTGGCTTTGATTTGAATGTGAGTGCGAGTGGAGAGGTTGACTTGGAAGAGAATGGGAGTGGTAGGGGTTGTTTTAGTGGTGTGGGTGGTACTGTAGTAGCTGAGGTAGATAGGAAGACAAAGAAGGAGCAAGGTTCAAATAATGAAGTACGGGTTGGGGGTCGCGTGTTGCGCTCAAGGTCTAATGGGGGGAAGGATAAAAGAGTGTACTATGGAGAGAATGAAGATGTTGTTTCTGATAGTGATAGAGAATGTAGTGGGTTTGAGAGGGTGAAAGTTAAGACGGAATGTGAAGAAGCTGACGAATTTTTGGCTGACAGTTGTGAGAATGAAAAAGCTAAGGTGAAGAAGGAAGGGAATGGCACGAGGAATTTGAAACGGAAGCGTGGGAGGCCTCCCAAAATAAATTTGAAAGTGGAAGATCAATTAGTTGATCATCGATTAGTCGATCATCAATTAGTTGATCAGTTGCCACGTAAGCGTGGAAGACCCCCTCTGGCCGGCAAACAAAACCATGTGGATGTGCATAATAGAAAAGAAAAGGCTGCCCTTCGAAAAGATAAAAAGGGTTTAACTATGAGACATGATGCTAATGTGAATGCAATGGATGATACAAATTCAAGGAAATCTGCTGAGGATGAGCTAGAAAAGAAGGAAGTCTCTTCTGGCAAGAAGTCTAAATTTAGTAAGGCTTCGGAAACTGACAACAATTTGGTGGCCTCACCATTAAGATCAAATACTGAGAATGCACTTACTGAAAAAAGTGGAAAAAATAGAGTAAAGCAGTTAGTGAGGGAGCAAATAAAGGAAATTCTCTCAGCTGCAGGCTGGACAGTTGACTATAGACCTAGGAATGGTAGACAGTACCATGATGCAGTGTATGTTAGTCTGGACGGACACACACACTGGTCAATCACCTTGGCCTACAAAAGGCTTAAAGAGTATTATGAAGCTGGTAATGGTGAAGGTAAGGCATATGGGCCAGGCTTCAAATTTACACCAATACCAGCACAGGATTTCAAAATACTCACAAAGGTAATTAACAAGCAAAGAAAAATGAAAGATAAATCTGTAGAGAAAGGGGGAAAGGGTGGAAATAAAGTCGATGGAGTCAGTGGTAACAAAAACAAAGAAAAGTCAGGTTCTGGTGCAGCCGTGGGTAAGTCAATGAAGAGGAAAATGAAAAGGAAGCGGTCACTTGGAGACACAGATGCTATATCACCTAACAGGATGCCAGTTCGTGCGAGGGATCATAAGCGACACAAAACACAAAATAAGCTGCGAAGTGGTCCATTGGTTCGTAATGCTGAGGAGATAGATTCAGAAACTGAGGGATATGTACTGTACAGTGGAAAAAGAACTTTGCTTGCCTGGATGATTGATTTGCGCACAGTCCTTCTAAATGGGAAGGTTCATTATAAGGCACCTGAAGATAAAAGTGCAGTACTGGATGGTAAGATCACAGGGGATGGCATTCATTGTGGCTGCTGTGATAAAATCATTACAATTTCAGAATTTGAAGTTCATGCAGGAAGAAAATTCGCTGATCCACTTCAAAATATATATGTGGAGGAAGGAAACTCTCTTTTACAGTGTTTGCTAGATTCGTGGAATAAGCAAGATGAATCTGAACGTCATGGTTTTCATTTTGTTGATGTTGCGGGTGAAGATCCGAATGATGATACTTGTGGGGTTTGTGGAGATGGTGGAGACCTGATATGTTGTGATGGTTGCCCATCAACATTCCATCAAGACTGCTTGGATATAGAAAAGTTTCCATCTGGTGATTGGCACTGCATTTATTGCTGTTGCAAATTTTGTGCGTCAGTTAATGGATGTTCAGACCAAAAGGATGCTGATAATGATCTTACTGTGTCAAAATTACTCACGTGCCGACTATGTGAGCAAAAATGTCACAGATCCTGCATTGAGGCAAATGATTGTAACACTATTGATTCCAGTGATGTGTTCTTTTGTGGAAACAGATGTCAAGAGTTATCTGAGAGACTTGAAATGCTCCTAGGGGTTAAACATGAAATTGAAGATGGATATTCATGGACTTTTATTCGTCGGTCAGATGTTGGGATTGATGCTTCTCAGATAAAACCTCAGATGGTTGAATGTAATTCTAAGCTTGCTGTTGCATTATCTATAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGGTCAATCTGATCCACAGTATTCTGTATAACCGTGGGTCAAATTTCAGTCGTCTGAGTTATAGTGGATTTGTTACTGCAATTCTAGAGAGAGGTGATGAGATAATTTCTGCTGCATCTATCAGGATCCATGGGAACCAACTAGCCGAGATGCCATTTATTGGAACCCGCTATATGTACAGGCGACAAGGAATGTGCCGCAGGCTTCTAAATGCCATTGAATTGGGACTCGGCTCTTTAAATGTTGAGTTATTGGTGATACCAGCTATCTCAGAACTCAGAGAAACTTGGACTTCCGTTTTTGGGTTTGAGCCTCTTGAATCAACAATCAAGCAAACAATACATAATATGAATCTATTGGTATTTCCTCATGTAGATATGTTACAGAAGAAGATATCAGAAGATGAATTGGCTGGTCATAAACCAATTCCTTCAGACGCTTTCAATCTTCAAACCAATCAAATAGTAAATAATTGCAATGGAGCGGGCTCATCTGGATCTGATTTGATCAATCATATTGAGATTCCTCCCCGCCCTAATACATGCCAGATAAAGGATGAAACCATATCGACTGAATCTGATTGTCATCTTCCTGAGGGTTCATTGAATAATGTACCTGACATGGCTAGCAACATTAATGATTATAGACAATCTTCAAGGGGTGACACATGTCAAGTTGTTCGTCAGACAGATGATGAGAATCCGGTCATGGACAACAGTATTAAAAATGTCTGTGAATATGTGACTGATACTTGTTGCCTAGCTGGAGATAGCCAGTTGAACAATTGCGCGGTTCCTTATGAGGAAAGACTGTGTCTCACATCTCGTATTAACACTGAGGCTACAGAAGGACAGTGTGTTTGTGTTTCGTTGGAGGTTACTGAAAGCTTTCCTAATCGTGTCGAAGTATCAAATGAAGTTATATCAAATAACAAAAGTGCTGAAGACTCGGAACCCTGTGGTGCAGAAAGTATTACAAGAGTTTCAAAAGTTTGTGCTGATTCTATTCACCAGGATTCATGTATAATTTCCGACAGTTGTGAACTGAGAAGCGACACTGACTGTGGTCAACCGAACTTCATGGGAACAGAAGAAAAACATAGTGAATTTATTAGTGTTTGTGGTTCTCATTCTAGAGCTAATGGTGATTGTGCCTCTGGTGAAGGTGCTTCCGCCACTAACGTGTTATTGCACCGTACATCACAGGACACGACCAATAACAAGCCTTGGGTGAAAGGGTCTTCAGAGGTATCTGAGCCTGATTTGCAGGTGGATGAAACTGAACGGAACAGTGGTCCCTCCCCGTGGAGCCCTAACACTGCTTCTGGTTGTGCATCTACGGGCAGTGCTTCTCGTGGTAGTGAGGCGATATTTTTGTCAAACCAAGCCAGTTGA 3768 0.4188 MREGLRSRARLGTVSGGEGVVHKKKVVVKSEAVDLDGEGLEVQNSTIEKKDEAARDVKEECGFDLNVSASGEVDLEENGSGRGCFSGVGGTVVAEVDRKTKKEQGSNNEVRVGGRVLRSRSNGGKDKRVYYGENEDVVSDSDRECSGFERVKVKTECEEADEFLADSCENEKAKVKKEGNGTRNLKRKRGRPPKINLKVEDQLVDHRLVDHQLVDQLPRKRGRPPLAGKQNHVDVHNRKEKAALRKDKKGLTMRHDANVNAMDDTNSRKSAEDELEKKEVSSGKKSKFSKASETDNNLVASPLRSNTENALTEKSGKNRVKQLVREQIKEILSAAGWTVDYRPRNGRQYHDAVYVSLDGHTHWSITLAYKRLKEYYEAGNGEGKAYGPGFKFTPIPAQDFKILTKVINKQRKMKDKSVEKGGKGGNKVDGVSGNKNKEKSGSGAAVGKSMKRKMKRKRSLGDTDAISPNRMPVRARDHKRHKTQNKLRSGPLVRNAEEIDSETEGYVLYSGKRTLLAWMIDLRTVLLNGKVHYKAPEDKSAVLDGKITGDGIHCGCCDKIITISEFEVHAGRKFADPLQNIYVEEGNSLLQCLLDSWNKQDESERHGFHFVDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHQDCLDIEKFPSGDWHCIYCCCKFCASVNGCSDQKDADNDLTVSKLLTCRLCEQKCHRSCIEANDCNTIDSSDVFFCGNRCQELSERLEMLLGVKHEIEDGYSWTFIRRSDVGIDASQIKPQMVECNSKLAVALSIMDECFMPYIDHRSGVNLIHSILYNRGSNFSRLSYSGFVTAILERGDEIISAASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLLNAIELGLGSLNVELLVIPAISELRETWTSVFGFEPLESTIKQTIHNMNLLVFPHVDMLQKKISEDELAGHKPIPSDAFNLQTNQIVNNCNGAGSSGSDLINHIEIPPRPNTCQIKDETISTESDCHLPEGSLNNVPDMASNINDYRQSSRGDTCQVVRQTDDENPVMDNSIKNVCEYVTDTCCLAGDSQLNNCAVPYEERLCLTSRINTEATEGQCVCVSLEVTESFPNRVEVSNEVISNNKSAEDSEPCGAESITRVSKVCADSIHQDSCIISDSCELRSDTDCGQPNFMGTEEKHSEFISVCGSHSRANGDCASGEGASATNVLLHRTSQDTTNNKPWVKGSSEVSEPDLQVDETERNSGPSPWSPNTASGCASTGSASRGSEAIFLSNQAS 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00951 1255 MobiDBLite consensus disorder prediction 1190 1255 - -
Phco6g00951 1255 MobiDBLite consensus disorder prediction 1218 1255 - -
Phco6g00951 1255 PANTHER PHD FINGER PROTEIN 12 288 1064 IPR042163 GO:0003714|GO:0045892
Phco6g00951 1255 MobiDBLite consensus disorder prediction 215 314 - -
Phco6g00951 1255 Pfam Tify domain binding domain 545 594 IPR032308 -
Phco6g00951 1255 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 756 923 IPR000182 GO:0016747
Phco6g00951 1255 SUPERFAMILY FYVE/PHD zinc finger 612 663 IPR011011 -
Phco6g00951 1255 MobiDBLite consensus disorder prediction 292 313 - -
Phco6g00951 1255 SMART PHD_3 622 663 IPR001965 -
Phco6g00951 1255 SMART PHD_3 664 724 IPR001965 -
Phco6g00951 1255 MobiDBLite consensus disorder prediction 266 291 - -
Phco6g00951 1255 ProSiteProfiles Zinc finger PHD-type profile. 620 665 IPR019787 -
Phco6g00951 1255 MobiDBLite consensus disorder prediction 232 254 - -
Phco6g00951 1255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 612 686 IPR013083 -
Phco6g00951 1255 SMART AT_hook_2 218 230 IPR017956 GO:0003677
Phco6g00951 1255 SMART AT_hook_2 186 198 IPR017956 GO:0003677
Phco6g00951 1255 MobiDBLite consensus disorder prediction 411 487 - -
Phco6g00951 1255 MobiDBLite consensus disorder prediction 1190 1204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00951 Phco-Chr6 9263494 9271066 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00951 6 9263494 9271066 Phco6g00951 6 9263494 9271066 ECH
Phco2g01759 2 48075770 48081632 Phco6g00951 6 9263494 9271066 PCT