Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01759 ATGAAGGAGGAAGAAAGCGCGGAAAGCGCAGAAAGCGCGAATTTAACCAATGCGAGGAAGAGGGGGAGAACAGATGAAGCAGTGGGAATCGTGGGTAATAATGGTATAGTGAAACAAGAGCCCTCAACGAGTCTTGAGGTGCATCTCAGGGAACAGCCGATGGAACAAATTCCCGGAAACAGCAATAGAAATGAGGTTCGGGAAAGGGAATTGGATAGCGATGAATTACGATTTAATGGAAATCTGAACCATTCAGAAGATAAGCTTTTGGGGCTGGAAATGATGGCCAAACTACAACGCCGCACCAGAGGTTTAAGACGCTTAAGGAAGATACATGGTGTGAATTTGGCGAATCAAACTGATACATGCCCTAGAAGATTAATTAAAAAGGAAATAGTAGAAGGGAGTCAGCCAATACCTCAGGGCGAGATGAATCAAGCTGAGAAGGTTGCGGGAAATGAGAAGAAAGTTTTGTTTGAGGAGGAAAAGGGTGTGAATACCCTTCCAAGAGTGAAGAGAATGAATTTCTTAAAACAAAAACGGTTTGGTCCAAGAAATACCAGGACACGTAGAAAGCTGAACACAGGAAAACGAACTTTGTTTTCGTGGATGATTGGTTTGAAAACAATAAAATCACGGGAGAGGGTTTATTACAGGGATCACAGGAGTAAAAGTATATCACTGGGTGGAGATGCCGTTGGAGATGGCATTCTATGTGACTGTTGTTCTCAAGTTGTGTCCATTTCTGAGTTTGAATTTCACTCATGGAGGCTACAAATCTTTAATCCATTGAGTAGAGTATCCAATCCACTACAAAACATATGTTTGGGGAGAGGAAGAGGACTTTGTCTCTTGCAATGCATGGCAGAAGCCTGGGATAAGCAAACTGATTTTTCTTCTAAATTGGTTCATGAGGGGAAAGAAAAAAGCGACGACATTTGTAGAGTTTGTGGGGAAAAGGGTGACCTCATCCGTTGCAATACTTGCCCATCAACTTTCCATCAGAGCTGCTTGGGTATTCAAACACTTCCAGATGGTGATTGGAACTGTATGAATTGCTGCTGCAAAATTTGTGGGTTTTATTGTGGAAAGGCAGAGATAAAGTTTGAAGGGTTTGTCCCGTTTGAGATATCGACGGAATGCCTTGTATGCGAGAGAAGATATCACCAATGCTGTCTTGCTGCCAGTGGAGGCAATTCTGCTCGTTCCAAAAGACTATCCTTATGTGGAAACGGATGTAGGGAGATATACGAGGAACTTCAAAAGCTTCTTCGAGTTAAACATGACATAGAGGATGGCTTGTCTTGGTCTTTTCTTTACCGGGAAGATGTTGACCCTAATTTAACAAAGTTAGAACCCGCTAAGGTTGAATGCAATGCCAAACTGGGTGTTGCATTATCGGTATTGAGTGAGAGCTTCATGCCATACATTGATGGAAGCGGGGCAGATATAATACAAAGTATTGTATACAGTTGTAGGTCAAACTTCCCTCGCCTCGACTGTAAGGGGTTTATTACTGTGATTCTTGAGAAAGATTATGAGATTATCAGCGTTGCATCAATCAGGATTCATGGGAACAAACTAGCAGAGATGCCATTTGTTGCAACTGTTTTTGGATATAGGAAGAAAGGAATGTTCGCACGGCTTCTAAAAGTAATTGAATCGACACTCAGCCACCTCAACGTTGAGTTATTGATCGTACCAGCCGTGAAACAAGCAAAAGAAACTTGGGTTCATTCTTTTAGGTTTGAGCCACTTGATTCGAGAACCGAGAGCATAATAAAGGGCGTGAATCTGTTGATGTGTCGTGGCACAGAAATATTACAGAAAAAGATACCAAAGCTTACATAA 1851 0.4203 MKEEESAESAESANLTNARKRGRTDEAVGIVGNNGIVKQEPSTSLEVHLREQPMEQIPGNSNRNEVRERELDSDELRFNGNLNHSEDKLLGLEMMAKLQRRTRGLRRLRKIHGVNLANQTDTCPRRLIKKEIVEGSQPIPQGEMNQAEKVAGNEKKVLFEEEKGVNTLPRVKRMNFLKQKRFGPRNTRTRRKLNTGKRTLFSWMIGLKTIKSRERVYYRDHRSKSISLGGDAVGDGILCDCCSQVVSISEFEFHSWRLQIFNPLSRVSNPLQNICLGRGRGLCLLQCMAEAWDKQTDFSSKLVHEGKEKSDDICRVCGEKGDLIRCNTCPSTFHQSCLGIQTLPDGDWNCMNCCCKICGFYCGKAEIKFEGFVPFEISTECLVCERRYHQCCLAASGGNSARSKRLSLCGNGCREIYEELQKLLRVKHDIEDGLSWSFLYREDVDPNLTKLEPAKVECNAKLGVALSVLSESFMPYIDGSGADIIQSIVYSCRSNFPRLDCKGFITVILEKDYEIISVASIRIHGNKLAEMPFVATVFGYRKKGMFARLLKVIESTLSHLNVELLIVPAVKQAKETWVHSFRFEPLDSRTESIIKGVNLLMCRGTEILQKKIPKLT 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01759 616 MobiDBLite consensus disorder prediction 1 37 - -
Phco2g01759 616 ProSitePatterns Zinc finger PHD-type signature. 314 353 IPR019786 -
Phco2g01759 616 SUPERFAMILY FYVE/PHD zinc finger 306 360 IPR011011 -
Phco2g01759 616 ProSiteProfiles Zinc finger PHD-type profile. 311 356 IPR019787 -
Phco2g01759 616 MobiDBLite consensus disorder prediction 49 68 - -
Phco2g01759 616 Pfam Tify domain binding domain 231 291 IPR032308 -
Phco2g01759 616 SMART PHD_3 357 414 IPR001965 -
Phco2g01759 616 SMART PHD_3 313 354 IPR001965 -
Phco2g01759 616 PANTHER PHD FINGER PROTEIN 12 137 613 IPR042163 GO:0003714|GO:0045892
Phco2g01759 616 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 299 412 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01759 Phco-Chr2 48075770 48081632 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01759 2 48075770 48081632 Phco2g01759 2 48075770 48081632 ECH
Phco2g01759 2 48075770 48081632 Phco6g00951 6 9263494 9271066 PCT