Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00943 ATGGAGCTCAGTAAAGTCACCCTAGAGATCTTCTCCAAACTGGAACACAAATGGCTCTCACATTGTAAACCCAACAACAAAACCCGCATTCTCAGCATCGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGAAGCTCTCATCCACCTCGAGGATCAGATCCGTCTCCGCACCTCCGATCCCCATGCTCAGGTCGCTGATTTCTTCGACATCGTCGCTGGCACTGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGCGACAGCTTCGGCAGGCCGCTCTACACCGCCAGAGAAGCCGTCCGTCTAGTCTCCGAGAGGAACTCCGAACTCTATAAGTTCAAATCCGGAGGCGTATTCCGCCGGCGCCGGAAACTCTCCTCCAGTAGCATGGATAACGTTTTGAAGCAAGTGTTCCAGAGGAAGGAGGACGGACGGTTGTTGACCTTGAAGGACACGTGCAAACCTCTCCTTATCCCTTGCTTCGACCTCAAGAGTTCCGCGCCGTTCGTCTTTTCGCGCGCCGACGCGTCGGAGTCTCCCAGCTTCGACTTCGAGCTCTGGAAGGTGTGTCGCGCCACGTCAGCGACGCCGAGCCATTTCAAGCCGTTTGACTTGGCTTCCGTCGACGGCAAGACCTTGTGCTCCGCCGTGGACGGCGGCCTGGTGATGAACAACCCTACGGCGGCGGCCGTCACGCACGTTCTCCACAACAAGCACGATTTCCCGTCAGTGAACGGCGTGGATGATCTCCTAGTCCTTTCCTTGGGGAACGGATCTTCGAACACCAAAGCGTGCGAGAATCGCACGTGCTCCACACCGTCGGTTGTTGACATTGTGCTGAACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAACGCCTTCTGCTGGAACCGTACGGACTACGTCAGAATCCAGGCCTCCGGTTTGGGAAGCGAAGCAATGAGGAAGGAGGAGGTGCTCGAAGAGAGAGGACTCGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGGAACAGGATAGATAGCTTCGTGCAACGTCTTGTTGCAACCGGAAAACCAAGCCCGCCGTCTAGTCCGTGCAAGGATTCCACCGTCAACCCTCTCGCTAACGGCCGCTAG 1140 0.5746 MELSKVTLEIFSKLEHKWLSHCKPNNKTRILSIDGGGTTAIVAGEALIHLEDQIRLRTSDPHAQVADFFDIVAGTGIGAILAAMITAGDSFGRPLYTAREAVRLVSERNSELYKFKSGGVFRRRRKLSSSSMDNVLKQVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFDLASVDGKTLCSAVDGGLVMNNPTAAAVTHVLHNKHDFPSVNGVDDLLVLSLGNGSSNTKACENRTCSTPSVVDIVLNGVSETIDQMLGNAFCWNRTDYVRIQASGLGSEAMRKEEVLEERGLESLPFGGKRLLTETNGNRIDSFVQRLVATGKPSPPSSPCKDSTVNPLANGR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00943 379 CDD Pat17_PNPLA8_PNPLA9_like 30 321 - -
Phco6g00943 379 SUPERFAMILY FabD/lysophospholipase-like 26 310 IPR016035 -
Phco6g00943 379 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
Phco6g00943 379 MobiDBLite consensus disorder prediction 363 379 - -
Phco6g00943 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Phco6g00943 379 MobiDBLite consensus disorder prediction 357 379 - -
Phco6g00943 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Phco6g00943 379 PANTHER PATATIN-LIKE PROTEIN 6 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00943 Phco-Chr6 9191765 9193049 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00943 6 9191765 9193049 Phco6g00943 6 9191765 9193049 ECH
Phco2g01742 2 47799618 47803468 Phco6g00943 6 9191765 9193049 PCT