Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01742 ATGCAGTATCCTCTAACGTTTTTGCTTGCACGGCTTTCGACCGGGATGGGAAGAGGTTTCCTGCCCCATGAGAAACTTGGCACCTCATCAATAGGATCCAAACTTGGTGTAGACGGTCTTGGGGATAGTAGGCTCTGTTCGAGGCAGAAGAAAAAGAGCGAACGCACTCAACAACCAACCACCACCACCACAACAACAACGCCTAAACTCAACACAATGGAGCTTAGCAAAGTAACGCTGGAGATCTTCTCCAAACTCGAGCAGCAATGGCTTTCCCACTACGAAGCCACGTCCAAAACCCGCATTCTCAGTATCGACGGCGGAGGAACCACCGCCATTGTCTCCGGCGCCGCCCTCGTCCACCTCGAGGACCAGATCCGAGCCCAAACCTCCGATCCACACGCGCAAATCGCCGATTACTTCGACATCATCGCTGGAACCGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCTGACGATGGCTTTGGCCGGCCTCTCTACACCGCCCGCGACGCGGTCCGCTTCGTCGCTGACAGCAACCGCGAACTGTACAAGCCGAAGTGTGCTGGCGTGTTCCGCCGCCGCCGCAGATTCTCAGCGCGGGGCATGGAAAACGCACTGAAGCGGGTTTTCCAAAGAAAAGAGGAAGAGCGGCGGTTGTTGACTATGAAGGACACGTGTAAGCCTCTGCTCATCCCTTGCTTTGACCTCAAGAGTTCTGCGCCATTTGTGTTCTCCCGAGCCGACGCGTCCGAGTCACCAAGTTTCAACTTCGATCTTTGGAAGGCGTGCCGCGCCACTTCAGCCACGCCTGGCCTCTTCGCGCCGTTCCATTTCTCATCCGTCGACGGAAAGACCTCGTGCGCCGCCGTCGACGGCGGCCTAGTGATGAACAACCCGGCCGCAGCGGCTGTAACGCACGTCATACATAACAAGCGCGACTTCCCCTCAGTGAACGGCGTGGAGGATCTCCTCGTGCTCTCGATCGGAAACGGAGGGCCGGCTAAGAGGGTTGATACCGCCGGTGAGTGCTCCACGTCGGCGGTGGTTGACATAGCGCTCGACGGCGTTTCCGAAACCGTTGACCAGATGTTAGGGAACGCCTTCTGCTGGAACCGTACGGATTATGTCAGGATTCAGGCGTTCGGCTTGGTAGAAGGAAAAGAAGAGAAGGTGCTGAACGAGAGAGTGCTGGAATCGTTACCGTTTGGGGGAAAACGATTACTGCAGGAAACTAATTCTAACCGAATCGAGAGCTTCGTGCAACGTCTTGTTGCTACCGGAAAGACTAGTCTGCCACCTAGTCCCTGCAAGGTGCCGCCGCAAGAATCTCGCTAA 1341 0.5652 MQYPLTFLLARLSTGMGRGFLPHEKLGTSSIGSKLGVDGLGDSRLCSRQKKKSERTQQPTTTTTTTTPKLNTMELSKVTLEIFSKLEQQWLSHYEATSKTRILSIDGGGTTAIVSGAALVHLEDQIRAQTSDPHAQIADYFDIIAGTGIGAILAAMITADDGFGRPLYTARDAVRFVADSNRELYKPKCAGVFRRRRRFSARGMENALKRVFQRKEEERRLLTMKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFDLWKACRATSATPGLFAPFHFSSVDGKTSCAAVDGGLVMNNPAAAAVTHVIHNKRDFPSVNGVEDLLVLSIGNGGPAKRVDTAGECSTSAVVDIALDGVSETVDQMLGNAFCWNRTDYVRIQAFGLVEGKEEKVLNERVLESLPFGGKRLLQETNSNRIESFVQRLVATGKTSLPPSPCKVPPQESR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01742 446 Gene3D Cytosolic phospholipase A2 catalytic domain 89 433 - -
Phco2g01742 446 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 103 306 IPR002641 GO:0006629
Phco2g01742 446 SUPERFAMILY FabD/lysophospholipase-like 99 388 IPR016035 -
Phco2g01742 446 CDD Pat17_PNPLA8_PNPLA9_like 102 402 - -
Phco2g01742 446 Pfam Patatin-like phospholipase 103 305 IPR002641 GO:0006629
Phco2g01742 446 PANTHER PATATIN-LIKE PROTEIN 6 72 439 - -
Phco2g01742 446 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01742 Phco-Chr2 47799618 47803468 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01742 2 47799618 47803468 Phco2g01742 2 47799618 47803468 ECH
Phco2g01742 2 47799618 47803468 Phco6g00943 6 9191765 9193049 PCT