Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00930 ATGGATAAATCTTTCAACTTTCTGCTTCTCATCACCCTCTTCCAACTTTTCTTCATTGCACCCTCTTTCGCTCAACAATCTTTCAGGCCCAAAGCCCTTGTTGTCTCCGTTACAAAACACGCATCAACTCTCCAATACGTAACTCAAATCAACCAAAGAACTCCTCTTGTCCCATTAAACCTTGTGCTTGACATCGGAGGCCAATTCCTCTGGGTCGATTGCCAGACCAACTACGTCTCCTCCAGTTACCGCCCTGCACGGTGCCGCTCCGCTCAGTGCTCCCTTGCCGGAGCCACCGGCTGCGGGGACTGCTTTTCTGCCCCCAGACCCGGCTGCAACAACAACACATGCGGCCTCACGCCGGACAACACCATCACCCACACCGCTACCGTCGGCGAGCTCGCTGAAGATACCGTCTCCGTCCAATCCACCAACGGCTTCAACCCGGGACGAAACGTCACCGTTTCCCGCTTCCTCTTCTCCTGCGCCCCCACCTTCTTACTCCAAGGACTCGCCACGGGAGTCTCCGGCATGGCCGGTCTCGGTAGAACGAAAATAGCTCTTCCCTCACAGTTCGCTTCCGCGTTTAGCTTCCACAGGAAGTTCGCCATCTGTCTCTCCTCCTCAAAAGGCGTCGTTTTCTTCGGCGACGGCCCTTACGTTCTTCTCCCCAACGTCGACGCCTCTCAGTTACTCACCTTCACCCCTCTGTTGATCAACCCCGTCAGCACCGCTTCCGCTTTCTCCCAGGGAGAACCCTCCGCCGAGTATTTCATCGGCGTGAAATCCATCAGAGTCGACGAAAAGGTCGTGCCCGTTAACACGACTTTGTTATCCATAAACAGCGACGGCGTTGGCGGAACGAAGATCAGTTCCGTTAACCCTTACACTGTGTTGGAGGCTTCGATCTTCAAAGCAGTGACGGAGGCTTTTGTAAAAGCATCTGCTGCGAGGAATATAACGAGGGTGGCTGCTGTGGCACCGTTTGAAGTGTGTTTCAGCAGTGAGAACGTGGTGGGCACGCGGTTAGGGGCGTCGGTGCCAACCATTGAGCTTGTTCTGCAGAACCAGAAAATTTGGAGGATTTTCGGAGCGAACTCGGTGGTGAGTGTGAGCGATGAGATACTATGTCTGGGGTTTGTTAATGGTGGTGAGAAACCGAGGACTTCGATTGTGATTGGTGGGTATCAAGTTGAGAATAATCTCTTGCAGTTCGATTTGGCTACTTCAAGATTGGGTTTCAGTTCTTTGCTCTTTGGAAGCCGAACTACGTGCGCAAACTTCAACTTTACCTCCACTCTCTAG 1305 0.5295 MDKSFNFLLLITLFQLFFIAPSFAQQSFRPKALVVSVTKHASTLQYVTQINQRTPLVPLNLVLDIGGQFLWVDCQTNYVSSSYRPARCRSAQCSLAGATGCGDCFSAPRPGCNNNTCGLTPDNTITHTATVGELAEDTVSVQSTNGFNPGRNVTVSRFLFSCAPTFLLQGLATGVSGMAGLGRTKIALPSQFASAFSFHRKFAICLSSSKGVVFFGDGPYVLLPNVDASQLLTFTPLLINPVSTASAFSQGEPSAEYFIGVKSIRVDEKVVPVNTTLLSINSDGVGGTKISSVNPYTVLEASIFKAVTEAFVKASAARNITRVAAVAPFEVCFSSENVVGTRLGASVPTIELVLQNQKIWRIFGANSVVSVSDEILCLGFVNGGEKPRTSIVIGGYQVENNLLQFDLATSRLGFSSLLFGSRTTCANFNFTSTL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00930 434 Pfam Xylanase inhibitor N-terminal 46 217 IPR032861 -
Phco6g00930 434 FunFam Basic 7S globulin 26 217 - -
Phco6g00930 434 SUPERFAMILY Acid proteases 38 424 IPR021109 -
Phco6g00930 434 Pfam Xylanase inhibitor C-terminal 256 415 IPR032799 -
Phco6g00930 434 ProSiteProfiles Peptidase family A1 domain profile. 46 415 IPR033121 -
Phco6g00930 434 Gene3D Acid Proteases 25 216 IPR021109 -
Phco6g00930 434 CDD xylanase_inhibitor_I_like 51 418 IPR033868 -
Phco6g00930 434 FunFam Basic 7S globulin 218 432 - -
Phco6g00930 434 PANTHER ASPARTYL PROTEASE-RELATED 8 432 IPR001461 GO:0004190|GO:0006508
Phco6g00930 434 Gene3D Acid Proteases 218 432 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00930 Phco-Chr6 9001507 9002811 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00930 6 9001507 9002811 Phco6g00930 6 9001507 9002811 ECH
Phco2g01720 2 47512072 47513355 Phco6g00930 6 9001507 9002811 PCT