Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00921 ATGACCATCTCAATGTTCATGTGCAGATTAAGACAACCCATAATAAACATTCCTTGCAGTGGGAAAAGACTCAATGTGAGACAAATTGAGAAAGAGAAAGTAGTGGTTGTAATGGGAGCCACAGGGGCAGGGAAGTCAAGGCTGTCGATTGACCTAGCCACATGTTTTCCATCAGAAATCATAAACTCCGACAAAATTCAAGTCTACCAAGGTCTCGACATAGTCACAAACAAAATCCCAAAGGAGGACCAACGTGGGGTGCACCACCACTTACTAGGAACAATAAACCCCAACATAGACTTCACACCCACTGATTTCATTGACACGTCATCATCGGCCATTGACACCATCACCAGAGCCCAGAAGCTTCCAATAATCGTTGGCGGCTCCAACTCGTATCTCGAGGCCTTGATCGACGACGACGATTACAAGTTCCGGTCACGCTACGATTTTATCTGCCTCTGGGTTGACGTCGCAATGCCCGTGCTTCAGTCCTACGTGGCGGAACGGGTTGACGACATGTTCCGTAACGGAATGGTGGATGAGCTGAGACCCTTTTATAGTCCCAACGGGGATTACTCGAGAGGGATTAGAAGAGCCATTGGGGTTCCTGAATTTGACGAGTACTTTCGGAGGGAGGAGTTTGTTGACGAGGAAACGAAGCAGAGGTTGTTGGAAGATGCGATTAAGGAAATAAAATTGAACACGTGGAAACTTGCGATGAAACAGTTGGGGAAGATTCACAGGCTGAGGAACGTTAAGAGATGGGAGATTCATCGCTTGGACGCCACGCCCGTGTTTCGAAGGCGTGGGGAAGAAGCCGACGAGGCGTGGAAGAAGGTGGTGGCGGAACCTAGTGCTATGGTCGTTGCTCGCTTTCTCTATGACTCCAAAAATAACGACAACGTTGTTTCTGGACTTAGACTGTTGCCAGCTTCAGAGAATGTTATGGCTGCGGCAACGTGCTAG 969 0.484 MTISMFMCRLRQPIINIPCSGKRLNVRQIEKEKVVVVMGATGAGKSRLSIDLATCFPSEIINSDKIQVYQGLDIVTNKIPKEDQRGVHHHLLGTINPNIDFTPTDFIDTSSSAIDTITRAQKLPIIVGGSNSYLEALIDDDDYKFRSRYDFICLWVDVAMPVLQSYVAERVDDMFRNGMVDELRPFYSPNGDYSRGIRRAIGVPEFDEYFRREEFVDEETKQRLLEDAIKEIKLNTWKLAMKQLGKIHRLRNVKRWEIHRLDATPVFRRRGEEADEAWKKVVAEPSAMVVARFLYDSKNNDNVVSGLRLLPASENVMAAATC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00921 322 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 258 - -
Phco6g00921 322 Pfam IPP transferase 67 140 - -
Phco6g00921 322 Pfam IPP transferase 145 244 - -
Phco6g00921 322 FunFam Adenylate isopentenyltransferase 5, chloroplastic 160 258 - -
Phco6g00921 322 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 293 IPR039657 -
Phco6g00921 322 Gene3D - 31 294 IPR027417 -
Phco6g00921 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 142 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00921 Phco-Chr6 8945849 8946817 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00921 6 8945849 8946817 Phco6g00921 6 8945849 8946817 ECH
Phco2g01719 2 47504827 47505747 Phco6g00921 6 8945849 8946817 PCT