Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01719 ATGAGCATGACGATGTCGAGAGTTATGTGTAGACCAACACAGCCTCTGAAAAACGTTCCTTCCAGTGGACAAAGCCAGATGATGAGGCCAAAAGAGAAGGTGGTGTTGGTGATGGGAGCAACAGGGAGCGGGAAAACGAGGTTGTCGGTGGACTTAGCAACATGTTTTCCCTCAGAAATCATAAACTCTGACAAAATGCAAGTGTACGAGGGGCTTGAGATTGTGACGAACAAGGCCACCAAAGAGGAGCAGCGGGGGATCCCACATCACCTGCTGGGGATACAGAACCCCGACACAGAGTTCACGGCCTCCGACTTCTGCGACGTTGCCTCACGCGCCATCGAGTCCATCACGCGCCGCGACAAGGTTCCGATAGTGGTGGGAGGATCCAACTCGTACATGGAGGCGCTGGTGGAGAGGTTCGGGCCGCGGTTCGAGTGGTGCTTTCTGTGGGTCGACGTGTCCGTGCCGGTGCTCCATTCCTACGTGGCGCAGCGCGTGGACCACATGCTCCGTTGCGGAATGGTGAACGAGTTGAGACCGTTTTTCAACGTCAACGGCGATTACGGTCGTGGGATAAGGAAGGCCATTGGGGTTTCTGAGTTCCACGCGTACTTTCGGCGGGAGGCGGCGGCGAGCGGCGAGACGAGGATGAGGCTTCTGCAGGAGGCGGTGAGGGACGTGAAGAGGAACACGTGCCACTTGGCATGCAAGCAACTTGGGAGAATCCACATGCTCCGAAGTGTTGAGGGGTGGAAGATCCACCGCGTTTGCGCCACGCCTGTGTTTCAGAAACGTGGCCACGACGCCAATGAGGCTTGGAATAACATGGTGGCGCAACCCTGTGCCTCCATTGTTTCTCAGTTTCTCAGTTCTGCCAACTCCACTTCTGGGGTCGCACCTTCTATGCAACCAAACTAA 921 0.5613 MSMTMSRVMCRPTQPLKNVPSSGQSQMMRPKEKVVLVMGATGSGKTRLSVDLATCFPSEIINSDKMQVYEGLEIVTNKATKEEQRGIPHHLLGIQNPDTEFTASDFCDVASRAIESITRRDKVPIVVGGSNSYMEALVERFGPRFEWCFLWVDVSVPVLHSYVAQRVDHMLRCGMVNELRPFFNVNGDYGRGIRKAIGVSEFHAYFRREAAASGETRMRLLQEAVRDVKRNTCHLACKQLGRIHMLRSVEGWKIHRVCATPVFQKRGHDANEAWNNMVAQPCASIVSQFLSSANSTSGVAPSMQPN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01719 306 Gene3D - 31 290 IPR027417 -
Phco2g01719 306 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 156 254 - -
Phco2g01719 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 174 IPR027417 -
Phco2g01719 306 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 290 IPR039657 -
Phco2g01719 306 Pfam IPP transferase 144 240 - -
Phco2g01719 306 Pfam IPP transferase 67 143 - -
Phco2g01719 306 FunFam Adenylate isopentenyltransferase 5, chloroplastic 156 254 - -
Phco2g01719 306 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01719 Phco-Chr2 47504827 47505747 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01719 2 47504827 47505747 Phco2g01719 2 47504827 47505747 ECH
Phco2g01719 2 47504827 47505747 Phco6g00921 6 8945849 8946817 PCT