Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00908 ATGGCGGCAGGCCCAACCTCACCCTCCGATCGACCCACCATGGTCCCTCCCCCAATGCTCGTCTCCGACTCATTCGCCAAGGATGCCATACTCGCATGGTTCCGCGGCGAGTTCGCCGCAGCCAACGCCATCATCGATGCCCTCTGCGCTCACCTAGCCACCTCCGCCCATGACTACGATGCTGTCTTCGCAGCCATCCACCGCCGTAGGCTCAACTGGATCCCCGTCCTCCAGATGCAGAAGTACCACTCCATCGCGGATGTCACCCTCGAGCTCCAAAGACTCTCGGACAGAAACCACAACGCAGAAGCGGAGGACAAATCCAAAGAGAAAACTACGTCGCCGGAGAGTGTCGTCGGAAATGATGCAGCTGATGAACACGAGTATGAATCACCCCAGAGCGAGATTACTGATTCGGGATCTCAAGAAACGCAGGCTAGTCCCATGAACGTTAATATATGTTCCAATCATGAAGATTGTGAAGGACGTTCTTCACAGTTTAAGTTGACTAAAGGTTTTACAGCAAAGGAGTCTGTCAAGGGACATATGGTGAATGTAGTAAAAGGATTGAAGTTGTACGAAGACATTTTCACAGATTCAGAACTGTGCAAGCTGACAGATTTTGTAAATGAGATCCATGTTGCTGGCCAGAATGGAGAACTATCCGGTGAAACTTTTATATTATTCAACAAGCAGATGAAGGGAAACAAGAGAGAGTTGATTCAGCTGGGTGTTCCAATATTTGGACAGATAAAGGAAGATGTAAAAAGTAATATAGAGCCAATTCCTGCGCTTCTTCAAGGTGTCATTGATCACCTCATTCAGTGGCAATTACTTCCCGAGTACAAAAGACCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAGTTTTCTCAACCATTCCTCAAACCACCACATCTGGATCAACCTGTGTCCACTCTTCTTCTCTCTGAATCAACTATGGCTTTTGGACGTATACTTATGAGTGAGAATGATGGAAACTACAAGGGACCTCTCATGCTCTCATTGAAGCAGGGATCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGACACGTAATGTGTCCATCCCCTAACAGAAGGGTCAGCATCGCCTTCTTCAGAGTGAGGCCAGATTCCAATCAATGTCAGTCACCAACTCCTGCCATGACAAATGCGATGACTCTGTGGCAACCTAGCATTGCTAGTCCATATGCTTTGCCAAATGGTGCTCTAAGTAGCTACGAGGGTATGGACATGATGCCGAAATGGGGAGTGCTTCGCAGTCCAATGGTGATGCTAACTCCCATGCGTCACGTGGCATTGACCCCCCGAAAACTTGCTGGTGGTGGAACTGGGGTGTTTTTGCCATGGAACATGCCATCTAGAAAACATGCCAAGCATCTTCCCCCACGTGCCCAAAAAGGGAGGCTTCTCACATTACCTTCCCCAGTTGAACCACAAGTGGGAGAGTCCACTTCCAAACCAAACATTTGTGTTGAAGGATAA 1518 0.4802 MAAGPTSPSDRPTMVPPPMLVSDSFAKDAILAWFRGEFAAANAIIDALCAHLATSAHDYDAVFAAIHRRRLNWIPVLQMQKYHSIADVTLELQRLSDRNHNAEAEDKSKEKTTSPESVVGNDAADEHEYESPQSEITDSGSQETQASPMNVNICSNHEDCEGRSSQFKLTKGFTAKESVKGHMVNVVKGLKLYEDIFTDSELCKLTDFVNEIHVAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDVKSNIEPIPALLQGVIDHLIQWQLLPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPVSTLLLSESTMAFGRILMSENDGNYKGPLMLSLKQGSLLVMRGNSADMARHVMCPSPNRRVSIAFFRVRPDSNQCQSPTPAMTNAMTLWQPSIASPYALPNGALSSYEGMDMMPKWGVLRSPMVMLTPMRHVALTPRKLAGGGTGVFLPWNMPSRKHAKHLPPRAQKGRLLTLPSPVEPQVGESTSKPNICVEG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00908 505 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 26 142 IPR044842 GO:0003729|GO:0006402|GO:0032451
Phco6g00908 505 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 284 381 IPR005123 -
Phco6g00908 505 SUPERFAMILY Clavaminate synthase-like 181 379 - -
Phco6g00908 505 MobiDBLite consensus disorder prediction 468 505 - -
Phco6g00908 505 Gene3D - 173 388 IPR037151 -
Phco6g00908 505 MobiDBLite consensus disorder prediction 100 147 - -
Phco6g00908 505 Coils Coil 85 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00908 Phco-Chr6 8838241 8843039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00908 6 8838241 8843039 Phco6g00908 6 8838241 8843039 ECH
Phco2g01699 2 47330969 47336680 Phco6g00908 6 8838241 8843039 PCT