Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01699 ATGGCGGCTGTCCCAGTATCGCGGACCGATCCACCGGCAATGGTGCCGCCGCCGCTCCTCGTTTCCGACTCCTTCGCCAAGGACGCCATTCTTGCCTGGTTTCGCGGCGAGTTCGCGGCAGCCAACGCCATCATCGACACACTCTGCGGTCACCTAGCGCACCTCGCTACAGCCTCCTCCGACTACGAAGCCACTTTCGCCTCCATCCACCGCCGCCGCATGAACTGGATCCCTGTCATCCAGATGCAGAAGTACCACTCCATCGCTGACATCGCTCTCGAGCTCCGCAGAGTCGCTGACAGGAAAACGGAGACAGAAGGCGCCAGGAAGAGCGAGAGTAGCTTGGACGAACAGAAATTGGAGAAGGAAACTTTGGAGACTGGTGGAAATGAAGCTGACGAAGGTGCGCCGGAGTATGAGTCGCCGGACAGTGAAATAACTGATTCAGGATCTCAGGAAATGCAACCCAGTGCACTGAACAATAATATATGTTCAAATCATGAAGAATGTGAAGGACGCTCTTCACAGATAAAGCTGACAAAAGGTTTTTCAGCAAAGGAGTCAGTGAAGGGGCATATGGTGAACGTTGTGAAAGGATTGAAGTTGTACGAGGATGTTTTTTCTGAATCAGAAATCTGCAAGCTGACTGATTTTGTGAATGATATCCATGCTGCTGGCCAGAACGGGGAACTCTCAGGCGAAACATTTATACTATTCAACAAACAGATGAAGGGAAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCGATATTTGGACAGATAAAGGATGATACCAAAAGCAATATAGAACCGATTCCAGCACTTGTCCATGATGTCATTGATCACCTTATTCAATGGAAATTGATTCCAGAGTACAAAAGACCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGAGAATTTTCTCAACCATTCCTGAAACCACCGCATTTGGACCAGCCTCTATCCACACTTCTTCTCTCTGAATCAACAATGGCTTTTGGGCGCATCCTTGTCAGTGAGAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGGAGGGGTCTCTTATAGTGATGAGGGGAAACAGTGCAGACATGTCAAGGCATGTAATGTGTCCATCCCCTAACAGAAGGGTGAGCATCAGCTTCTTTAGAGTGAAGCCAGATTCCAATCAATGTCAATCACCAAATCCTACCATGACAGCTGCAATGACTCTTTGGCAACCTGGCATTACTAGCCCATATACTTTGCCAAATGGAGTTCTTAGTGGCTATGAGGCAATAGATATGATGCCTAACTGGGGAATATTTGGTGCTCCAATGGTTATGCTACCCCCTATGCGCCCTATGGCAGTGCACTCTCGCAAACTTCCTCGAGGTGGGACTGGGGTTTTCTTGCCTTGGAAGGGAGCATCCAGAAAACACGCAAGGCATCTGCCACCTCGTGCCCAAAAAGGACGACTTATGGAATTACCCTCCCCAGTTGAATCACACTTGGGAGAGTCTACGTCTGAACCCAGTATAGCTGTTGAAGGGTAG 1548 0.4864 MAAVPVSRTDPPAMVPPPLLVSDSFAKDAILAWFRGEFAAANAIIDTLCGHLAHLATASSDYEATFASIHRRRMNWIPVIQMQKYHSIADIALELRRVADRKTETEGARKSESSLDEQKLEKETLETGGNEADEGAPEYESPDSEITDSGSQEMQPSALNNNICSNHEECEGRSSQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFSESEICKLTDFVNDIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDTKSNIEPIPALVHDVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILVSENDGNYKGPLMLSLKEGSLIVMRGNSADMSRHVMCPSPNRRVSISFFRVKPDSNQCQSPNPTMTAAMTLWQPGITSPYTLPNGVLSGYEAIDMMPNWGIFGAPMVMLPPMRPMAVHSRKLPRGGTGVFLPWKGASRKHARHLPPRAQKGRLMELPSPVESHLGESTSEPSIAVEG 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01699 515 MobiDBLite consensus disorder prediction 103 129 - -
Phco2g01699 515 SUPERFAMILY Clavaminate synthase-like 190 389 - -
Phco2g01699 515 MobiDBLite consensus disorder prediction 103 165 - -
Phco2g01699 515 MobiDBLite consensus disorder prediction 144 165 - -
Phco2g01699 515 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 26 133 IPR044842 GO:0003729|GO:0006402|GO:0032451
Phco2g01699 515 MobiDBLite consensus disorder prediction 475 515 - -
Phco2g01699 515 Gene3D - 183 398 IPR037151 -
Phco2g01699 515 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 294 391 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01699 Phco-Chr2 47330969 47336680 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01699 2 47330969 47336680 Phco2g01699 2 47330969 47336680 ECH
Phco2g01699 2 47330969 47336680 Phco6g00908 6 8838241 8843039 PCT