Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00907 ATGAATTTCTTCAAGTCCGTTTTCCTTGAGGACCAGGATCCACCGCGACCTGAATCCGGATCGAGCAATGAGCCGCCAGACCAGGACCCGGATCTCGACTCCCCGCCCCAATCGAGCACCGCCAATTCCGGGGGCGGTGTCAGCGACGGTTGGAATTTCGGCGGCTTCATGAAAACCCTAACATCCAAATCGGAATCTATAATCGAGACCTACCGTCGCGATCTGCAGGAATTCAGCACCGGTTTGAAGAAGGAAATTGAGGTGGCGCAGGGCTCTCTCGGGACCGTGGGTCACGTCATTGACGAGTTTGGAAACACCGTCGTCAAAGGAACGGCTCAGATCATATCTCAAGGTAAGGACGCCATCCTTGCTGTCGATCTCGATTCTGATTCTGATAATAATAGCGCCAATAGGAAGAGCCTGGATTTGATGCGGTATAGTAGATTCGACGCTCAGGTTCGTGCGATTCAGGGTGACGTTAGCACTTACTCCGAGGAGCCCGAGGATTTGAGTGAGTTCAATGAATGGAAATTAGGGTTTTTGTTGGAGGGGAAAAGTGATGAAATGGAGGGGCTTTTAAGAGAGAACGATAATATGGAGAGTGCTTACAAAAGAGTTGTCCCGAGCAGTGTGGATCACGAAACTTTCTGGTATAGGTATTACTATAAGGTTTATAAGCTCAAGAAAGCTGAAGACGTTAGGGCTAGGCTTGTAAGTGGAATTTCTGGGGAAGATGAGGATTTGAGTTGGGAAGTTGAAGATGATAATGATGATGAGCATAGAGGTGGCGCTAAATCTGCGGTAATGAATAAAGAGGTTGGTGGGGACAGTGTGGATACCCAGTTACGTGTTGGCTACGATGAAGGGGGAGCGAAGAAATTGGATGTGGAAGAAGAGCCTAAAGTAGAAAAGAGAGAGAATTTGTTGCAGAGTGAGGAAGTTGGCAGCAAGATAGATAAGTTTGACGAACCACATATTGTGAAATCTGAAATTGTTGGTGAGATGGGTGGTGTTGATGAGGCGTCAAAAGTGGATGTTGGTGTGAGCAAGAATGATTCTGCTGCTGAAATTGATGAGAAGGTGAAGGAAAGGGAGGGTGGTGATGAGAAATCTCCCAGTAAAAGTAATGACTCCTCAGTGATTGAAATTAAGCCCTCGGCAAATGAGGAGGGGGACGAGGAGGACCTTGGGTGGGATGATATTGAGGATCTTAGCAGTATTGATGTGAAGGAAACATCGCATAGTGGTGGCACAAACAAAGTTGATTTGCGGAAGCGATTTAGTGCTGCCGAAGAAGAGGAAGACTTGAGTTGGGGCACTGATGACGATGACGATGATGAGCCTGCCAAGGTTTGA 1356 0.4749 MNFFKSVFLEDQDPPRPESGSSNEPPDQDPDLDSPPQSSTANSGGGVSDGWNFGGFMKTLTSKSESIIETYRRDLQEFSTGLKKEIEVAQGSLGTVGHVIDEFGNTVVKGTAQIISQGKDAILAVDLDSDSDNNSANRKSLDLMRYSRFDAQVRAIQGDVSTYSEEPEDLSEFNEWKLGFLLEGKSDEMEGLLRENDNMESAYKRVVPSSVDHETFWYRYYYKVYKLKKAEDVRARLVSGISGEDEDLSWEVEDDNDDEHRGGAKSAVMNKEVGGDSVDTQLRVGYDEGGAKKLDVEEEPKVEKRENLLQSEEVGSKIDKFDEPHIVKSEIVGEMGGVDEASKVDVGVSKNDSAAEIDEKVKEREGGDEKSPSKSNDSSVIEIKPSANEEGDEEDLGWDDIEDLSSIDVKETSHSGGTNKVDLRKRFSAAEEEEDLSWGTDDDDDDEPAKV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00907 451 MobiDBLite consensus disorder prediction 289 329 - -
Phco6g00907 451 SMART wurzfinal6 176 228 IPR005607 -
Phco6g00907 451 Coils Coil 182 202 - -
Phco6g00907 451 PANTHER SYNAPSE-ASSOCIATED PROTEIN 16 399 - -
Phco6g00907 451 Gene3D BSD domain 138 239 IPR035925 -
Phco6g00907 451 ProSiteProfiles BSD domain profile. 176 228 IPR005607 -
Phco6g00907 451 SUPERFAMILY BSD domain-like 145 233 IPR035925 -
Phco6g00907 451 MobiDBLite consensus disorder prediction 289 451 - -
Phco6g00907 451 MobiDBLite consensus disorder prediction 434 451 - -
Phco6g00907 451 MobiDBLite consensus disorder prediction 403 433 - -
Phco6g00907 451 MobiDBLite consensus disorder prediction 1 48 - -
Phco6g00907 451 Pfam BSD domain 176 232 IPR005607 -
Phco6g00907 451 MobiDBLite consensus disorder prediction 352 372 - -
Phco6g00907 451 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00907 Phco-Chr6 8835523 8836878 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00907 6 8835523 8836878 Phco6g00907 6 8835523 8836878 ECH
Phco2g01698 2 47328070 47329407 Phco6g00907 6 8835523 8836878 PCT