Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01698 ATGAATTTCTTTGCATCCGTTTTCTCCGACTCCAACAATGCGCACCCAAACGAATTGCAAGAGCAAGCGAATCGCGATTCCTCGCCGCCGGAGCACCGGTCCGATTCCTCCGACGACGGTGCGTGGGAAATCGGCGGTCTGTGGAAAATGCTGAGCGCGAAATCGGAATTGATCATCGAGACCTACCGTCGCGACCTGCAGGAATTCGGTACCGGCTTGAAGAAGGAGATTGAGGTGGCTCACGGTTCTCTGGAGACGGTGGGCCACGTCATTGACCAGTTCGGGAACACCGTCGCGAAAGGCACCGCTAACATTATATCTCACGGCAAGGACGCCATCCTCCTCGATTCCGAGTCCGATAATGATGTTAATACCAAAAACAAGCGCTGTACGGACAAAAAGAGCTTCAATTCGAGGCGCTACAGTCGGTTTGACGCTCAGGTTCGGGCCATTCAGGGTGACGTTAGTACTTACACCGAAGTGCCTGAGGATTTAGATGGGTATGAGAAGTGGAAATCGGGGTTTTCGTTGGAGGGGAAGAGCGAGGAAATGGAAGAGTTGCTGAGAGAGAATGAGGGTATGGAGAGTGTTTACAGGAGGGTTGTACCTAATGTTGTTGACCGTAATACGTTTTGGTGTAGGTATTATTATAGAGTTTATAGGTTTAAGAAAACTGAGGATATGAGGGCTAGGCTCGTAAGGAGAATGTCGAGGGAGGAGGAGGAGTTGAGCTGGGATGTTGAAGATGATGATGATGATGATGATGATGATGAAGAGGAGGAGGAGGAGGATAGTGATAAAAATAATAAGGGGAAAGAAGGAGATTCTAATGGAACAAAGAGGTTGAATGTAGAAGAGATGTATAAGTCTTGTGAGGACGGGTCTAAGGAAGAAAAGAGCGGTGATTTATTGCAAAGCAGGGGAATTGGTGATAAGAAGGATGAGTCTGTTGAAGAATCAAAGGTTGACAAGACTAACAAGGAAATGGGTGATGGGAGCAAGAAAAAAGTGGACGCAGAGGATGACACTGGTAACATGAATGATTCTGGTGTAGATTCAGATAAGAAAGTGATCATGGAAAAGAAGATTGATGATGGAAAAGATTCATTGGTTGCAAATAAGCACCCTGGGAATGAGAAGGAGGAGGAGAAGGAGGAGGACCTTGACTGGGATGAGATTGAGGATCTTAGTAGAATTGATGAAGAGAAGGTAACTCAAACAGGGAGCCCAACCAAAGTTGATTTGCTGAAGCGCCTCAGTACTGCACAAGAAAATGAAGAAGACTTGAGTTGGGATATTGAAGATGATGATGATAAGCCTGCTAATTCTAAGGCTTGA 1338 0.4626 MNFFASVFSDSNNAHPNELQEQANRDSSPPEHRSDSSDDGAWEIGGLWKMLSAKSELIIETYRRDLQEFGTGLKKEIEVAHGSLETVGHVIDQFGNTVAKGTANIISHGKDAILLDSESDNDVNTKNKRCTDKKSFNSRRYSRFDAQVRAIQGDVSTYTEVPEDLDGYEKWKSGFSLEGKSEEMEELLRENEGMESVYRRVVPNVVDRNTFWCRYYYRVYRFKKTEDMRARLVRRMSREEEELSWDVEDDDDDDDDDEEEEEEDSDKNNKGKEGDSNGTKRLNVEEMYKSCEDGSKEEKSGDLLQSRGIGDKKDESVEESKVDKTNKEMGDGSKKKVDAEDDTGNMNDSGVDSDKKVIMEKKIDDGKDSLVANKHPGNEKEEEKEEDLDWDEIEDLSRIDEEKVTQTGSPTKVDLLKRLSTAQENEEDLSWDIEDDDDKPANSKA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01698 445 MobiDBLite consensus disorder prediction 25 39 - -
Phco2g01698 445 Coils Coil 222 242 - -
Phco2g01698 445 SMART wurzfinal6 171 223 IPR005607 -
Phco2g01698 445 MobiDBLite consensus disorder prediction 353 382 - -
Phco2g01698 445 MobiDBLite consensus disorder prediction 265 343 - -
Phco2g01698 445 Pfam BSD domain 171 227 IPR005607 -
Phco2g01698 445 PANTHER SYNAPSE-ASSOCIATED PROTEIN 13 391 - -
Phco2g01698 445 SUPERFAMILY BSD domain-like 141 229 IPR035925 -
Phco2g01698 445 ProSiteProfiles BSD domain profile. 171 223 IPR005607 -
Phco2g01698 445 MobiDBLite consensus disorder prediction 243 264 - -
Phco2g01698 445 Coils Coil 177 197 - -
Phco2g01698 445 MobiDBLite consensus disorder prediction 239 445 - -
Phco2g01698 445 MobiDBLite consensus disorder prediction 8 24 - -
Phco2g01698 445 Gene3D BSD domain 133 234 IPR035925 -
Phco2g01698 445 MobiDBLite consensus disorder prediction 8 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01698 Phco-Chr2 47328070 47329407 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01698 2 47328070 47329407 Phco2g01698 2 47328070 47329407 ECH
Phco2g01698 2 47328070 47329407 Phco6g00907 6 8835523 8836878 PCT