Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00895 ATGGCCAACTGCTCCTATGCTTCCACTTTTCTCCTTTTCTTTTTATTCTCTTTTCTACATGTGGAAGCTATTTTAGACCCTGCTGATTTCCTCGCTCTGCAATCCATTCGTAAAGCCCTGGAAGACATGCCTGGTTCCCATTTCTTCTCCTCCTGGGATTTCACCGCTGACCCATGCAACTTCGCCGGGGTTTACTGCGACTCCGACAGGGTCATCGCCCTCAACCTCGGCGATCCCAGGGCTGGCTCCCCCGGACTCACCGGCCGCCTCGACCCCGCCCTCGGCAAGCTATCCGCGCTCGCCGAGTTCACCGTTGTCCCCGGCAGAATCTACGGTCCTCTCCCAGAATCCCTCTCCGGTTTGAAGAACCTCAGGTTCTTTGGCGTCAACCGCAACTTCATCTCCGGCGAAATTTCGACCAAGCTCGGCGAGTTACGCAGCCTCAGAACCATCGATCTCAGCTACAATCAACTCACCGGGCGCATTCCTCCAACCGTGGGATCCCTACCGGAGCTAACCAACTTGATCCTCTGTCATAACCGCCTCTCCGGTTCGCTCCCCCGGTTCGAGTCACACACTTTAACACGTCTCGACCTAAAGCATAACTCTCTCTCCGGTTCGCTCCCCCCCAACTCGCTCCCTCCCTCCCTGCAGTACCTCTCCCTGGCCTGGAACAAGCTCACCGGCCCAATAGACCACCTCCTGGGCCGCCTCGACCAGCTTAACTATTTGGACCTTAGTCTCAACCAGTTCACGGGCCCAATCCCGGACCGGATCTTTTCCTTCCCACTCACGAATCTGCAGCTGGAGAGGAACCAGTTCTCGGGTCCGGTCCAGCCCGTTCATCAGGTGTCCATCCCGACCGTTGATCTTAGTTACAACCGGTTGTCCGGTCAGATATCGCCAATGCTGGCGAGCGTGCAGTACCTGTACCTGAACAACAACCGGTTCACGGGTCGGGTACCGGCTAGCTTCGTGGAGCGGTTGCTGGACGCGAGCATTCAGATACTTTACTTGCAGCATAACTATCTGACAGGGATTGAGATAAGCCCAACGGCGGTGATTCCAGAGAGAAGCTCCCTGTGTCTGCAGTATAATTGCATGGTCCCGCCGGTAGAGACGCCCTGCCCCTTGAGGGCCGGCAACCAGAAAACCAGGCCTACTACGCAGTGCAACCAGTTGAAAACCTGA 1191 0.5642 MANCSYASTFLLFFLFSFLHVEAILDPADFLALQSIRKALEDMPGSHFFSSWDFTADPCNFAGVYCDSDRVIALNLGDPRAGSPGLTGRLDPALGKLSALAEFTVVPGRIYGPLPESLSGLKNLRFFGVNRNFISGEISTKLGELRSLRTIDLSYNQLTGRIPPTVGSLPELTNLILCHNRLSGSLPRFESHTLTRLDLKHNSLSGSLPPNSLPPSLQYLSLAWNKLTGPIDHLLGRLDQLNYLDLSLNQFTGPIPDRIFSFPLTNLQLERNQFSGPVQPVHQVSIPTVDLSYNRLSGQISPMLASVQYLYLNNNRFTGRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVETPCPLRAGNQKTRPTTQCNQLKT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00895 396 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 394 - -
Phco6g00895 396 Gene3D Ribonuclease Inhibitor 213 395 IPR032675 -
Phco6g00895 396 Pfam Leucine Rich repeat 191 206 IPR001611 GO:0005515
Phco6g00895 396 Pfam Leucine Rich Repeat 147 169 IPR001611 GO:0005515
Phco6g00895 396 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 189 278 - -
Phco6g00895 396 Gene3D Ribonuclease Inhibitor 26 212 IPR032675 -
Phco6g00895 396 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 91 186 - -
Phco6g00895 396 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Phco6g00895 396 SUPERFAMILY L domain-like 39 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00895 Phco-Chr6 8712499 8713689 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00895 6 8712499 8713689 Phco6g00895 6 8712499 8713689 ECH
Phco2g01687 2 47228811 47229986 Phco6g00895 6 8712499 8713689 PCT