Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00844 ATGGTATCACTAGAAAGATCAAGAAAGAAAATTATGCTACCGAAGAAATTCATGGTGCATTTTTCGCTGTGTTTTGTGATGGGGTTCTTCACAGGCTTTGCTCCTACAGGTAAATCTATATTTCACAGCCAAGTTGATTCTTCAAATAGGTCAGAATTTGCACCACAGCCTATTCAAGTGTCACAGAAGACAACAGATGTCAATAGAAGTTGGAGAGCTCCGACACCAAGTTCTGTAGTCCACAAGCATGAAAAACCATGGCCCCAGTTGAAGCCTAGAACACTTATAATCATTGTAACTCCAACAAGCACTAAACTTCCCATCCAAGCAGTGGTTTTTTTGACAAGGTTGGCAAACACTATAAAGCTGGTTCCTCAACCATTGTTGTGGATTGTTGTGGAAGGCCAAACAGAATCTTCAGAACTTTCAAAGACGCTTAGGAACACTGGAATCATGTATAGGCATTTGGTTTCCAAGGAAAACTTCACGGACTTGGAAGCTGAGCTGAATCACCAGAGAAATCTTGCACTCAAGCTCATTGTGCATCACAGGCTAAGTGGGATAGTACACTTTGCTGAGCTTTCCAACGTTTATGATCTCGAATTTTTCCAACAACTAAGATATATTCAGGTATTTGGAACATGGCCAACGGCATTGTTAGCAGCAAACAGAAACAAAGTGATAATAGAAGGACCAGTGTGTGATTCTTCACAAGTCATAGGGTGGCATTTAAGGAATATGAACAATGAAACAGACACAATTACTCCTCCAATTCATATTTCAAGTTTTGCATTCAATAGTTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTATCTTCAAGACACCTCTCAGAATTCAATAAAATTCGTGAAGCAAGTTGTTGTAGAGGATGAAGCCAAGTTGAAGGGAATTCCCCCAGAGGACTGCTCCAGAATCTTGCTTTGGCGTTTCAATTTTCATGCCCTAATCACTTCAAATCACAAATCTCTCAGTACTACTTCCAAAATAAATTGGAAAGAATGA 1032 0.4041 MVSLERSRKKIMLPKKFMVHFSLCFVMGFFTGFAPTGKSIFHSQVDSSNRSEFAPQPIQVSQKTTDVNRSWRAPTPSSVVHKHEKPWPQLKPRTLIIIVTPTSTKLPIQAVVFLTRLANTIKLVPQPLLWIVVEGQTESSELSKTLRNTGIMYRHLVSKENFTDLEAELNHQRNLALKLIVHHRLSGIVHFAELSNVYDLEFFQQLRYIQVFGTWPTALLAANRNKVIIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSYLQDTSQNSIKFVKQVVVEDEAKLKGIPPEDCSRILLWRFNFHALITSNHKSLSTTSKINWKE 343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00844 343 CDD GlcAT-I 95 322 IPR005027 GO:0015018|GO:0016020
Phco6g00844 343 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 15 328 IPR005027 GO:0015018|GO:0016020
Phco6g00844 343 Pfam Glycosyltransferase family 43 117 321 IPR005027 GO:0015018|GO:0016020
Phco6g00844 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 94 340 IPR029044 -
Phco6g00844 343 FunFam Glycosyltransferases 94 335 - -
Phco6g00844 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 334 IPR029044 -
Phco6g00844 343 MobiDBLite consensus disorder prediction 64 84 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco6g00844 Phco-Chr6 8283700 8286320 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00844 6 8283700 8286320 Phco6g00844 6 8283700 8286320 ECH
Phco2g02007 2 50781576 50783748 Phco6g00844 6 8283700 8286320 PCT