Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02007 ATGGGTTCACTAGAAAGATCAAAAAAGAAAGTTCTTCTATGGAAGAAGGCCATGCTCCATTTTTCCCTATGTTTTGTGATGGGATTTTTCACAGGCTTAGCTCCAACAGGTAAATCTTCTATCTTTTCCACCAAAGTTGCTGTTTCAAATAGGACACAGTTTGCTCCACAGCCTGCTGAAATGTCACACCTCACAACAAATGTCAATAAAAGTTGGATAGCTCCTCCTCCAGTCACCATGCCCATGAACCCTACAATCCTTGAAACTGAAAAGAAAAAAGCCACACCCAAGTTAAAAGAACAGCCCCAGTTGAAGCCGAGAAGACTCATAATCATTGTGACTCCAACAAGCACAAAACTACCCCACCAAGCAGTGTTTTTGAGAAGGTTGGCAACTACTATAAAGCTTGTTCCCCAACCATTGCTGTGGATTGTTGTGGAAGCAAAAACAAATTCCACAGAACTTCCTGAGATACTGAGGAAAAGTGGCATCATGTATAGGCATGTGGTTTTCAAGGAAAACTTCACTGAATTAGAAGCTGAACTGAATCACCAGAGAAATCTCGCACTCAAGCACATTGAGCACCACAGACTCAACGGCATTGTACACTTTGCTGGCCTTTCTAATGTCTATGATCTCCAATTCTTCCATCAGCTTAGGGATATTGAGGTGTTTGGAACATGGCCAACTGCATTGTTAGCTGCACATAGGAAGAAAGTGAAAATCGAAGGACCTGTTTGCGATTCATCACAAGTGATTGGTTGGCATCTAAGGAATATGAACAATGAAACTGATACAATCACTCCCCCAATTCATATTTCAAGTTTTGCATTTAATAGTTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAGTTAAAGGGAATTCCACCAGAGGACTGCTCCAAAATCTTGCTCTGGCGTTTCAATTTTCGGGCCCAAACCACCTCAAATCACTAA 1032 0.4196 MGSLERSKKKVLLWKKAMLHFSLCFVMGFFTGLAPTGKSSIFSTKVAVSNRTQFAPQPAEMSHLTTNVNKSWIAPPPVTMPMNPTILETEKKKATPKLKEQPQLKPRRLIIIVTPTSTKLPHQAVFLRRLATTIKLVPQPLLWIVVEAKTNSTELPEILRKSGIMYRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNFRAQTTSNH 343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02007 343 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 13 340 IPR005027 GO:0015018|GO:0016020
Phco2g02007 343 CDD GlcAT-I 108 337 IPR005027 GO:0015018|GO:0016020
Phco2g02007 343 Pfam Glycosyltransferase family 43 130 334 IPR005027 GO:0015018|GO:0016020
Phco2g02007 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 339 IPR029044 -
Phco2g02007 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 109 343 IPR029044 -
Phco2g02007 343 FunFam Glycosyltransferases 108 343 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco2g02007 Phco-Chr2 50781576 50783748 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02007 2 50781576 50783748 Phco2g02007 2 50781576 50783748 ECH
Phco2g02007 2 50781576 50783748 Phco6g00844 6 8283700 8286320 PCT