Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco6g00818 | ATGTCAATGGCAATTCTTGGCGTGCAAGCATTTCGCCCTCCTCCATTAACATCCACCTCCGACCCACCTTCTCTTTTTGATGGCACCACCAGGTTGTACATCAGTTATTCATGCCCTTATGCACAACGTGTATGGATAACCAGGAACTACAAGAGACTACAAGACAAGATCCAATTGGTCCCTATTGATCTTCAAGATAGGCCAGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTACCGTCCTTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTGATCAAGTATGTAGATGCCAACTTTGAAGGGACACCTTTGTTTCCTGGTGATCCTGCTAAGAAAGAGTTTGGTGAACATCTATTATCCCATGTTGATACATTCAACAAAGACACGTCCTCTTCATTGAAAGGGGATGCTGTACACCAAGCAAGTTCTGCCTTTGAGTACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTTCTTGGTCAATTCAGTTTGGTGGATATTGCCTACATTCCATTTGTTGAAAGATTTCAACCTGTCTTTGTCGACTTGTTCAAGCATGACATCACCGAAGGAAGGCCAAAACTTGCAACATGGATTGAGGAGGTGAACAAGATTGATGCTTATACACAGACAAAAGTCGATCCCCAGGAAATCGTTGATAGATTCAAGAAACGTTATCTGTCTCAACAGTGA | 720 | 0.425 | MSMAILGVQAFRPPPLTSTSDPPSLFDGTTRLYISYSCPYAQRVWITRNYKRLQDKIQLVPIDLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPGDPAKKEFGEHLLSHVDTFNKDTSSSLKGDAVHQASSAFEYLENALGKFDDGPFFLGQFSLVDIAYIPFVERFQPVFVDLFKHDITEGRPKLATWIEEVNKIDAYTQTKVDPQEIVDRFKKRYLSQQ | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco6g00818 | 239 | SUPERFAMILY | Thioredoxin-like | 24 | 110 | IPR036249 | - | |
| Phco6g00818 | 239 | CDD | GST_C_Lambda | 114 | 232 | - | - | |
| Phco6g00818 | 239 | Pfam | Glutathione S-transferase, N-terminal domain | 32 | 108 | IPR004045 | - | |
| Phco6g00818 | 239 | Gene3D | Glutaredoxin | 3 | 106 | - | - | |
| Phco6g00818 | 239 | Pfam | Glutathione S-transferase, C-terminal domain | 143 | 209 | - | - | |
| Phco6g00818 | 239 | FunFam | Lambda class glutathione S-transferase | 107 | 238 | - | - | |
| Phco6g00818 | 239 | SFLD | Glutathione Transferase (cytosolic) | 31 | 212 | IPR040079 | - | |
| Phco6g00818 | 239 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 28 | 109 | IPR004045 | - | |
| Phco6g00818 | 239 | FunFam | Glutathione S-transferase L2, chloroplastic | 3 | 106 | - | - | |
| Phco6g00818 | 239 | Gene3D | - | 107 | 239 | - | - | |
| Phco6g00818 | 239 | SUPERFAMILY | GST C-terminal domain-like | 105 | 234 | IPR036282 | - | |
| Phco6g00818 | 239 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 8 | 235 | IPR044629 | GO:0004364 | |
| Phco6g00818 | 239 | SFLD | Main (cytGST) | 31 | 212 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco6g00818 | Phco-Chr6 | 8067216 | 8069581 | Dispersed/Proximal |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco2g01988 | 2 | 50586228 | 50588346 | Phco6g00818 | 6 | 8067216 | 8069581 | ECH | |
| Phco6g00818 | 6 | 8067216 | 8069581 | Phco6g00818 | 6 | 8067216 | 8069581 | ECH | |
| Phco2g01988 | 2 | 50586228 | 50588346 | Phco6g00818 | 6 | 8067216 | 8069581 | PCT |