Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01988 ATGGCAACAGCCGGCGTGCAAGAAGCTCGTATTCCCCCACTAACTTCCACCTCCGAGCCACCTCCTCTTTTCGACGGAACCACCAGGTTGTACATCAGTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTACAAGGGACTACAAGACAAGATCGAACTGGTTCCTATTGATCTTCAAAACAGGCCTGCCTGGTATAAGGAGAAAGTCTACCCAGAAAACAAGGTGCCATCATTGGAGCACAATGGGAAGGTCTTGGGAGAAAGTCTCGATTTGGTCAAATACATAGATGGCAACTTCGAAGGTCCATCTCTGGTTCCCAGTGATCCTGCCAAGAAAGAATTTGGTGAGCAGTTGATTTCTTATGTTGATACTTTCACCAAAGAGCTGTACTCTGCACTGAAAGGAGATCCAATACAACAAGCCAGTCCTGCTTTTGATTACTTGGAGAATTCTCTTGGTAAATTTGATGATGGGCCATTCTTTCTTGGTCAATTTAGCTGGGTGGATATTGCCTATGTTCCATTTGTTGAAAGATTCCAGCTCGTATTTTTTGAGGTGTTCAAACATGATATAACTGAAGGAAGACCTAAACTTGCAGCATGGATTGAGGAACTGAACAAGATTAATGCGTATACACAAACAAGAGGTGATCCCAAGGATATTGTTGATCTTTTCAAGAAACGTTTTTTGGCTCAACAGTAA 714 0.4314 MATAGVQEARIPPLTSTSEPPPLFDGTTRLYISYICPYAQRVWITRNYKGLQDKIELVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYIDGNFEGPSLVPSDPAKKEFGEQLISYVDTFTKELYSALKGDPIQQASPAFDYLENSLGKFDDGPFFLGQFSWVDIAYVPFVERFQLVFFEVFKHDITEGRPKLAAWIEELNKINAYTQTRGDPKDIVDLFKKRFLAQQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01988 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 233 IPR044629 GO:0004364
Phco2g01988 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Phco2g01988 237 MobiDBLite consensus disorder prediction 1 20 - -
Phco2g01988 237 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Phco2g01988 237 SFLD Main (cytGST) 29 210 - -
Phco2g01988 237 CDD GST_C_Lambda 112 230 - -
Phco2g01988 237 SUPERFAMILY Thioredoxin-like 18 108 IPR036249 -
Phco2g01988 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Phco2g01988 237 Gene3D Glutaredoxin 1 104 - -
Phco2g01988 237 FunFam Lambda class glutathione S-transferase 105 236 - -
Phco2g01988 237 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Phco2g01988 237 Gene3D - 105 237 - -
Phco2g01988 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Phco2g01988 237 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01988 Phco-Chr2 50586228 50588346 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01988 2 50586228 50588346 Phco6g00818 6 8067216 8069581 ECH
Phco2g01988 2 50586228 50588346 Phco2g01988 2 50586228 50588346 ECH
Phco2g01988 2 50586228 50588346 Phco6g00818 6 8067216 8069581 PCT