Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00803 ATGGTTGAAGGCAAATACGGTCGCAGTGTCGATGATTGCAATGCGAACAAACAATTTGGCCTTTCTAAACGACGTCTGGTGGTGTTGTTGATCAGGAACCGTAATGCTGATCAGTGGAAAGAGACAAAAAAAAATAAAATGAATGTGGTAGGAAAAGTTGGAAGCTTGATATCTCAAGGTGTGTACTCAGTTGCAACCCCTTTTCACCCCTTTGGTGGGGCTATTGATGTGATTGTTGTTCAGCAACAAGATGGGACATTTCGGAGTACGCCTTGGTATGTTCGGTTTGGTAAATTTCAGGGTGTTCTCAAAGGTGCAGAAAAGTATGTTAAGATAAATGTTAATGGTGTTGAGGCCAATTTTCATATGTGTCTTGACAACTCAGGGGAGGCTTATTTCTTGAAGGAGGTGGATGATGATAAAGTGATTGATTCAATTGGGGTTGTTCAAGATTCTATTGAAAAAAAGAATGTCTGTTTGAGTATTGGTCATAGACTTGATCATTGCATCTCGGATTCTGGGGTTCTGAAGTTGAAAGATGGGAGTGATTCCTCAGTTGGGCGTGTGCCTCAAATTCAAAGGGCAGAATCTGATGTTGATAGGAGATTTTATGAATTTCCAGATGATGGATCTTCTTTAGAAGAGTCAGTTGAGTTGTCAGAATACGACTCTAATTCATATGGGAGCCTAGAGGGAGACAATTTTGTAGAGTCACAGGGTGCACATCCAGAGATGGTCTTGGTGAGTGTTGATGGTCATATATTAATGGCCCCTATCTCAGAAACAGAGCAAACTGAGGAGTCTGTGCAGTTAAAAACTCCTCAATTTCATATGGGACCAAACGAAGAGACTGACTTATGTGAAGGCAATGGAGAGTTTCGAGCAAATGCTTGGGCTGCTGATTGTATTAGTCAGCTGGATTCTCAAACAACTGATGTCCATCCTAGATGTTGTAACATTAATGGTGATGATAAAACTTTTAAGCTCTCACACGAAGTTTGTCAAAGAGAGAAGGTACATATTAGTCAAACACAGGAATCCTTAGAGATTAAAAATCCAGAAGATCGTGTGAAAACTGATTCAGAAGTGGCTGCATCAGGTATCAATAGGGAGAATGTTTTCAAAAGCTGTTTGGAGCTACAAGATTTTGGTCAGCAGGCTGGAAATGCTGCTGATTTACAAGATACAGGTTCTTCATTCGAGATTCGAAATTCAGCAGAGGAATCTAATGCAAGTTGTTTTGTAGTTAATGAAAATGAACAAGAGAGGATTGTGCAACCTAAAAACGGTGATGATTTATCACCTCCTAGTTGTTCTATTTCTTCTAATGGCCATGGATATCCAAAATCAGAATTGGAAATTCAAGAGGTTGAGAAAAATGCATCCCGAGAAGTTGTAACTGATCCTGGCTATCGTTCAGTTATTACTGAAACAGAACAGAATAATGAAGGTGTTGTCAAGTCAATATCAGATAATGAGGTAGATGAGAGTCAACAAACCCCTGCACTCAAAGCTGTTAGGCCTACATGTGAGGTAGTAGAACCTCAAACAGAAACTTCAAATAAAGGGGATCAAAGCCACTTGGGTTTGGGATTTGAGATTTCACTTTGTGGTCATGAACTTAAGCTGGGCATGGGTTCAGTAGCTGCTGCTGAAGTGTTTGAAGCGTATCGCATTTCTGCAGTTGATTTCACAAGTTCTGCTCCATCAATAATTAAAAATCCAAATCTTGTTATCAAGTTTCAAGAGAGGTACATGACGTGGGAAAAGGCTTCTCCTCTTGTTCTTGGAATGGCTATTTATGGTTTAGATTTACCTGTTGAGCCCAAAGATACGATTCCTGTGGAACAGGATCATGCGTTGAAGTCTAGGGATAATGATCTAGGATCATCTCCAGCTGGGCGCAGATGGAGACTTTGGCCCATTCCTTTTCGAAAGGTCAAAACATTTGATCATACTAATGGCAATGCATCAAATGAGGAAGTGTTTCTTGATTCTGAGTCTGGATCTTTTGCAGACCAAACTCCAACATCCAGTACCCAGGGGTCTCCTCGTAAGCAATTTCTAAGAACAATTGTTCCCACTAATGAGCAGATAGCTTCCTTAAATCTAAAAGATGGTCAAAATTTGGTAACATTCAGTTTCTCTACAAGGGTTCTCGGTACACAACAGGTTGATGCTCATATTTATTTATGGAAGTGGAACGCAAGAATTGTTATTTCAGACGTTGATGGAACTATTACCAAGTCTGATGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAGAGATTGGACGCAATCTGGAGTGGCTAGGCTTTTCTGTGCCATTAAGGAAAATGGATACCAGCTACTTTTTCTGAGTGCCCGTGCAATTGTCCAGGCATATCTAACTAGAAACTTCTTGTTTAACCTGAAACAGGATGGAAAAACCCTACCAAATGGACCTGTTGTTATCTCACCTGATGGATTATTTCCCTCACTTTACCGAGAAGTGATACGAAGGGCACCACATGAATTCAAGATTGCTTGTTTAGAGGATATCAAAAAACTTTTCCCTTCTGACTATAATCCATTCTACGCGGGATTTGGAAATAGAGATACAGATGAACTTAGTTACAGAAAGATTGGGATCCCAAAGGGCAAAATTTTTATTATTAACCCTAAGGGTGAGGTAGCTATTAGTCACCGAATTGGTGCAAAGTCGTATACATCATTACATACCCTTGTGAATGACATGTTTCCACCAACTTCTTTGGTTGAGCAGGAGGACTACAACTCATGGAACTATTGGAAAACGCCATTGCCAGATTTAGATTAG 2817 0.4022 MVEGKYGRSVDDCNANKQFGLSKRRLVVLLIRNRNADQWKETKKNKMNVVGKVGSLISQGVYSVATPFHPFGGAIDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKYVKINVNGVEANFHMCLDNSGEAYFLKEVDDDKVIDSIGVVQDSIEKKNVCLSIGHRLDHCISDSGVLKLKDGSDSSVGRVPQIQRAESDVDRRFYEFPDDGSSLEESVELSEYDSNSYGSLEGDNFVESQGAHPEMVLVSVDGHILMAPISETEQTEESVQLKTPQFHMGPNEETDLCEGNGEFRANAWAADCISQLDSQTTDVHPRCCNINGDDKTFKLSHEVCQREKVHISQTQESLEIKNPEDRVKTDSEVAASGINRENVFKSCLELQDFGQQAGNAADLQDTGSSFEIRNSAEESNASCFVVNENEQERIVQPKNGDDLSPPSCSISSNGHGYPKSELEIQEVEKNASREVVTDPGYRSVITETEQNNEGVVKSISDNEVDESQQTPALKAVRPTCEVVEPQTETSNKGDQSHLGLGFEISLCGHELKLGMGSVAAAEVFEAYRISAVDFTSSAPSIIKNPNLVIKFQERYMTWEKASPLVLGMAIYGLDLPVEPKDTIPVEQDHALKSRDNDLGSSPAGRRWRLWPIPFRKVKTFDHTNGNASNEEVFLDSESGSFADQTPTSSTQGSPRKQFLRTIVPTNEQIASLNLKDGQNLVTFSFSTRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGRDWTQSGVARLFCAIKENGYQLLFLSARAIVQAYLTRNFLFNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIGAKSYTSLHTLVNDMFPPTSLVEQEDYNSWNYWKTPLPDLD 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00803 938 Pfam lipin, N-terminal conserved region 47 141 IPR007651 -
Phco6g00803 938 SMART lns2 738 894 IPR031315 -
Phco6g00803 938 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 532 617 IPR031703 -
Phco6g00803 938 PANTHER LIPIN 47 938 IPR026058 -
Phco6g00803 938 MobiDBLite consensus disorder prediction 666 685 - -
Phco6g00803 938 MobiDBLite consensus disorder prediction 425 448 - -
Phco6g00803 938 MobiDBLite consensus disorder prediction 432 448 - -
Phco6g00803 938 SUPERFAMILY HAD-like 730 880 IPR036412 -
Phco6g00803 938 Pfam LNS2 (Lipin/Ned1/Smp2) 691 914 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00803 Phco-Chr6 7963838 7975175 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00803 6 7963838 7975175 Phco6g00803 6 7963838 7975175 ECH
Phco2g01972 2 50440873 50447702 Phco6g00803 6 7963838 7975175 PCT