Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01972 ATGAATGTGGTGGGCAAAGTTGGAAGCTTGATAACCCAAGGTGTCTATTCAGTTGCTACCCCTTTTCATCCCTTTGGTGGGGCGGTTGATGTCATTGTTGTTCAGCAGCAAGATGGCACGTTCCGCTGCACGCCGTGGTATGTTCGCTTTGGTAAGTTTCAAGGTGTGCTCAAAGGTACTGAAAAAGTTGTTCGGATAAACGTCAATGGGGTTGAATCACACTTCCACATGTATCTTGACAATTCCGGGGAGGCTTATTTTGTAAAAGAGGTGGATGATGATGGTGGTGATAAAGGAATAAAGTCAAATGGGACTGCTGATAACTCTGAGTGTAGTCAAGAAGACGTTGGTGTTGAAATTGATAAAAAAAATAATAGTTATCTGAGCATGGATAATAGGCTTGGTCACAGACTTGACCATAGCATATCTGATTCACGGGTGCCTTATCTAACTGGTGAAGACCATTCCTCGGTTTTGTCACAACTTCAAAGAGCAGAATCTGATGTCGATAGGAGATTTTATGAATTCCCTGATGATCAATCCTCTTTTGAAGGTTCACTTGATGTTTCAGAATATGATTCTACTAGATATGAGACTCTAGACGTGGAGAATTTTATGGACTCACAGGGCTCCCATCCGGAGGTGGTTTTGGTCAGTGTTGATGGTCATGTATTGACGGCCCCTATCTCAGAATCAGAGCAGAATGAGGACAATGTTCAGTTAAAAAATCCTCAATTTCATCTAGGCCCAGGTGAAGGGAGTGACTTCTATGAGGGCAATGGGGAACTTATTTCTGATGAAAATGCTTGGACTGCTGATTATGTTAGTCAGATGGATGCTTCTAGTAGTTATGACACTAAGGTTGGTGATGATACTTCCGGGCTCCTTTTGGAAGCTCAAAGACAGGAGGAAAATAATTGTTGCACTGAGGAAACCTTAGTGATTAAAAATCAAGAAAATCATCTTTTGCAAACTGATTCAGAAGAGGTTGTATCTTGTATGAAGAGAGAGAGTGTTTTCAAAAGTTGTTTGGAATTACACGAGTTTGCTCAGCAGGCTGGAAATGCTGATTTACAAGATGTAGATTCTTCATTGGAGGTTCAAAATTCAGCAGAGGAATCTATTACAATTTGTTCAATTACTGATGAGAATGAAGACGGAAATATTCAGGCTGATTTACAAGATGTAACAAGTTCTTCACTGGAGGTTCGAAATACAGCAGAGGAATTCATTGCAAATGGTTCAATTACTGATGAAAATAAACAGGAAAACATCGAACAATGTAGAAAAACTGACGGGTTATCTCCCCTTAGTGTGCCTTCTTCCTTGGATGACCATAGTTTTCCAGAATTAGAAGTAGAACTTCAAGAGGTTGATAAAGATGCATCAGTGAAAGTTGACACTGGTTCTGGCAGTCATTCTGGTACTACGGATATTATTGAATGTAATGATGAACATGTTGGAGAGTCAGTATCAAATGATCAGGTAGGTGATAGTCAACAAACTCCTGCAATTGAAGATGCCAGTAAGAAAAGTGAACTAACTGAACCTCAAACAGAAACTTCCAACGAGGAGAACCAATGTCATTCTGCTTTGAGATTTGAGGCCTCACTTTGTGGTCATGAACTTAAGGTGGGTATGGGTTTAGTTGCTGCTGCTGAGGTTTTTGAAGCACATCGGATATCTGTGGAGGAATTTAGAAGTTCTGCACCGTCCATAATTAAGAATGAAAATCTGGTTTTGAAGTTCAGAGAGAGGTATGTGCGGTGGGAAAAGGCTGCTCCTGTTGTCCTTGGAATGACTGTATTTGGTTTAGACTTACCTGTTGATCCCAAAGATACAATTCCAGTGGGACAGGATGGTGCAGTAAAGGCTACAAATGAAGATTCCGGGCCAGCTCCATCTGGACGCAGATGGAGACTTTGGCCAATTCCTTTTAGAAGAGTAAAGACAATTGAGCACAATGATAGTGCATCAAAGGAGGATGTATTTGTAGATTCCGAGTCTGATTGGCAAACTTCTATTGTCGAACCTTCTCCAACATCTTCTAGGCATGAGTCTCCTCGCAAGCAATTTGTGAGGACAAATGTTCCTTCTAATGAGATGATGGCGTCCTTAAATCTCAAGGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAACACAGCAGGTTGATGCTCATATTTACTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGACGTTTTGGGGCAGGTCATGCCTTTAGTTGGCAAAGATTGGACACAGTCTGGAGTGGCAAGGCTTTTCTCAGCCATTAAAGAGAATGGATACCAGCTACTGTTTTTGAGTGCCCGTGCTATTGTCCAAGCTTATCTTACCAGGAACTTTTTGGTTAACCTGAAACAGGATGGCAAGACCTTACCCAATGGACCTGTTGTTATTTCTCCTGACGGATTATTTCCCTCTCTTTACCGAGAAGTAATAAGAAGGGCACCTCATGAGTTCAAGATAGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAATCCATTTTATGCGGGGTTTGGCAATAGAGACACGGATGAACTTAGTTACAGGAAGATTGGAATCCCGAAGGGCAAGATATTTATTATCAATCCCAAGGGTGAAGTCGCAACAAGTCACCGTATTGATTCAAAATCCTACACATCATTACACACACTCGTCAATGACATGTTCCCTCCCACTTCTTTGGTTGAGCAGGAGGATTTCAACTCATGGAATTATTGGAGAATGCCTTTTCCAGACGTGGATTAG 2829 0.4111 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRCTPWYVRFGKFQGVLKGTEKVVRINVNGVESHFHMYLDNSGEAYFVKEVDDDGGDKGIKSNGTADNSECSQEDVGVEIDKKNNSYLSMDNRLGHRLDHSISDSRVPYLTGEDHSSVLSQLQRAESDVDRRFYEFPDDQSSFEGSLDVSEYDSTRYETLDVENFMDSQGSHPEVVLVSVDGHVLTAPISESEQNEDNVQLKNPQFHLGPGEGSDFYEGNGELISDENAWTADYVSQMDASSSYDTKVGDDTSGLLLEAQRQEENNCCTEETLVIKNQENHLLQTDSEEVVSCMKRESVFKSCLELHEFAQQAGNADLQDVDSSLEVQNSAEESITICSITDENEDGNIQADLQDVTSSSLEVRNTAEEFIANGSITDENKQENIEQCRKTDGLSPLSVPSSLDDHSFPELEVELQEVDKDASVKVDTGSGSHSGTTDIIECNDEHVGESVSNDQVGDSQQTPAIEDASKKSELTEPQTETSNEENQCHSALRFEASLCGHELKVGMGLVAAAEVFEAHRISVEEFRSSAPSIIKNENLVLKFRERYVRWEKAAPVVLGMTVFGLDLPVDPKDTIPVGQDGAVKATNEDSGPAPSGRRWRLWPIPFRRVKTIEHNDSASKEDVFVDSESDWQTSIVEPSPTSSRHESPRKQFVRTNVPSNEMMASLNLKDGQNLVTFSFSSRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQVMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLVNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVATSHRIDSKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWRMPFPDVD 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01972 942 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Phco2g01972 942 MobiDBLite consensus disorder prediction 459 527 - -
Phco2g01972 942 Pfam LNS2 (Lipin/Ned1/Smp2) 697 918 IPR013209 -
Phco2g01972 942 SUPERFAMILY HAD-like 734 884 IPR036412 -
Phco2g01972 942 MobiDBLite consensus disorder prediction 489 508 - -
Phco2g01972 942 MobiDBLite consensus disorder prediction 414 445 - -
Phco2g01972 942 PANTHER LIPIN 1 942 IPR026058 -
Phco2g01972 942 SMART lns2 742 898 IPR031315 -
Phco2g01972 942 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 535 618 IPR031703 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01972 Phco-Chr2 50440873 50447702 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01972 2 50440873 50447702 Phco6g00803 6 7963838 7975175 PCT