Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00794 ATGGACTCTCTTCCTACAATTCACCACCATCACCTCTCACTCTCTCACTCCCCACCACAACGGAGTTTGAAGTTCTTCCATGGTTATTCATTTCCAACATCCTTCTCTTCCCTTCATCCATTCTCCTCCATCAGAGCCTCATCTTCATCCTCACCCAGACAAAATGCATTTCAGAAACCCCAAACCGCCATAACCCAACTTCTCAAAACCCTACACCCTCTTCTCTCCCCTCTCGTCAAACCCACCTGCATCGCCATAGCCGCCACCGCATTCTCCTTCATGCGCCTCCACCCTCCCCCGGTTGCATCGGCACTTTCACATGCCCCTCCGCCCCCCTCCTCCGCGTCGGAAACTCTTCCCGATGACTCGGCCGCGTCGGAAACTCTGCCTGACGACACGGCCGCGTCGGAAACTCTGCCTGACGACACGGCCGCGTCGGAAACTCTCTCCGACGAGAGAGCCGCGTCAGAAACTCTCTCCGACGAGAGAACCGCCGCAGAGCAATTGAGCGACGACGTCCTAGAGCTTGAGTCCCTCCTACGGACAAAAATCAGAGCCAGCGAAATCGACGAAGCGCTCCTCGTCCTGGACCGTCTAATCGAACTCGACCCGGAGGAGCTCGAGTACCCGTTCGTGAAGGCGCACCTGCGCCTGGTCAACGGCGAGAACGAACTCGCCGCGAAGGGGTTTGAGGACTTGCTTCAGAGGGATCCGTTCCACGTGGAGACGTATCGATGCCTGTTAATGCTAATTTCGGAGACGAAGGCGCCGACCATAGAGCTTCTGAAGAAAACCGAAGAGGCCGTGAAGGTTTGCGCGGAGCAAGAGAGGGATTCCGAAGTGAGAGACTTTAAGTTGTTGATTGCGCAGCTAAAGGTTATCGATGGGGATTTATCTGATGCGATGAAGGTGTATGAGGAGCTTGAGAAGGAAGAACCACAGGATTTTAGACCTTACTTGGGTCAGGGCATTGTGTATACTATGCTGAAAAAGAATGATGAAGCTGAGAAGCAATTTGAGAAGTTTCGCACGCTTGTTCCCGATAATCATCCTTATAAGCTGTATTTTGAGGACAATTCTAGGATTTTGGAGATGGGACTACTAGGTGCAAAGAGCTGA 1119 0.529 MDSLPTIHHHHLSLSHSPPQRSLKFFHGYSFPTSFSSLHPFSSIRASSSSSPRQNAFQKPQTAITQLLKTLHPLLSPLVKPTCIAIAATAFSFMRLHPPPVASALSHAPPPPSSASETLPDDSAASETLPDDTAASETLPDDTAASETLSDERAASETLSDERTAAEQLSDDVLELESLLRTKIRASEIDEALLVLDRLIELDPEELEYPFVKAHLRLVNGENELAAKGFEDLLQRDPFHVETYRCLLMLISETKAPTIELLKKTEEAVKVCAEQERDSEVRDFKLLIAQLKVIDGDLSDAMKVYEELEKEEPQDFRPYLGQGIVYTMLKKNDEAEKQFEKFRTLVPDNHPYKLYFEDNSRILEMGLLGAKS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00794 372 MobiDBLite consensus disorder prediction 103 167 - -
Phco6g00794 372 SUPERFAMILY TPR-like 185 349 IPR011990 GO:0005515
Phco6g00794 372 Coils Coil 291 311 - -
Phco6g00794 372 Gene3D Tetratricopeptide repeat domain 122 366 IPR011990 GO:0005515
Phco6g00794 372 PANTHER TRANSMEMBRANE PROTEIN 254 351 - -
Phco6g00794 372 MobiDBLite consensus disorder prediction 109 153 - -
Phco6g00794 372 ProSiteProfiles TPR repeat profile. 316 349 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00794 Phco-Chr6 7835440 7836558 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00794 6 7835440 7836558 Phco6g00794 6 7835440 7836558 ECH
Phco2g01965 2 50351748 50352839 Phco6g00794 6 7835440 7836558 PCT