Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01965 ATGTTCAGTCTCATATCTCCCACTGGGGCTTTACCCATGGATTCTCTTCCAAAACTGCGCCACTCCAATCTCACTCTCAGCCACCACATATCTCCATACCCCACGCTCTTATCACCTTCACTCTCTTTCCGCTCTCGACCACCACCACACTTTCCCTCTTCATCGTCGTTCAGGTTACCTTCCATCAGAGCCTCCTCTTCACGCTCCTCAAACGACCCTGCGTTTCACTCCTCCAAAAACGCCCTCTCTCTATCCCCGCTTCTCCAAACCCTAAACTCCTTCCTCTCCCCCCTCGCCCAAACCACCTGCATCGTTATCGCCGCCACCGCCTTCTTCTTCATGCGATTCCACCACACGCCCGCCATCGCCGCCACCCTCTCCCCGCCCGCTGCCAACTCCGAGACTGCGCTCACCGAGGAGGAAGCCGAGAGAGTTCTGGAGGAGCGGCTCAGCGCCAACCCCGCCGACGCCGACGCTCTCCGCGCGCTCATGGAGTGCAAGATCAAAGCGCGCAAGCTTGACGAAGCGTTCGCCGTTCTGGACCGTCTCATCGAGCTCCAGCCGGAGGAGTACGAGTGGCCGCTGCTGAAGGCCAACATGCACATCTACAACGATGAACACGCCGCTGCGCGTGAACTGTTCGAGGAAATGTTGAAGAAGGACCCGCTCCGCGTCGAAGCGTTCCACGGCCTCGTCATGGCGACTTCGCAGTTGAATGAGCCGTTGAGAGCGTTGTTGAAGAGAGTACAGGCAGCGACTGAGACGTGCAAGAAGCAGAATAGGGACTCGGATGTGAGGGACTTCAGGCTGTTGATTGCGCAGATTAAAGTGATGGAAGGGGATTTCCCTGAGGCGCTCAAGGCTTATCAGGATTTGGTGAAGGAAGAACCCAGGGATTTCAGGCCTTATTTGTGTCAGGGTATTATATATACCCTCTTAAGGAAGAAAGACGAAGCTGATAAGCAATTTGATAAGTTTCGCAGGCTTGTTCCTAAGGACCATCCTTACATGGAGTATTTTGAGGACAACATGTTCGCGACCAAGTTCTTCTCGCAGAAATTGGAGAGGGAGGGAGCAGGTGCTAGGGACTGA 1092 0.5495 MFSLISPTGALPMDSLPKLRHSNLTLSHHISPYPTLLSPSLSFRSRPPPHFPSSSSFRLPSIRASSSRSSNDPAFHSSKNALSLSPLLQTLNSFLSPLAQTTCIVIAATAFFFMRFHHTPAIAATLSPPAANSETALTEEEAERVLEERLSANPADADALRALMECKIKARKLDEAFAVLDRLIELQPEEYEWPLLKANMHIYNDEHAAARELFEEMLKKDPLRVEAFHGLVMATSQLNEPLRALLKRVQAATETCKKQNRDSDVRDFRLLIAQIKVMEGDFPEALKAYQDLVKEEPRDFRPYLCQGIIYTLLRKKDEADKQFDKFRRLVPKDHPYMEYFEDNMFATKFFSQKLEREGAGARD 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01965 363 Pfam Tetratricopeptide repeat 270 298 IPR019734 GO:0005515
Phco2g01965 363 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 55 335 - -
Phco2g01965 363 Coils Coil 242 262 - -
Phco2g01965 363 Gene3D Tetratricopeptide repeat domain 130 346 IPR011990 GO:0005515
Phco2g01965 363 SMART tpr_5 266 299 IPR019734 GO:0005515
Phco2g01965 363 SMART tpr_5 300 333 IPR019734 GO:0005515
Phco2g01965 363 SMART tpr_5 157 190 IPR019734 GO:0005515
Phco2g01965 363 Pfam Tetratricopeptide repeat 141 198 - -
Phco2g01965 363 MobiDBLite consensus disorder prediction 47 75 - -
Phco2g01965 363 SUPERFAMILY TPR-like 140 332 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01965 Phco-Chr2 50351748 50352839 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01965 2 50351748 50352839 Phco6g00794 6 7835440 7836558 PCT