Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00768 ATGCTCCATTGCGATCGGGCAACTAAAGGTGGGGAGGATCTTGGTGACATGACTCAGTGTGTTTTGCAAGAGGGGTCATTGTATCTCAAGATGCAGCCAGGAGGAGGGGTAGTAGTAAAATGTGGTGACAGCTATGACGATGATGTGAGTTTGAGGAAAGAAGAGACAAGAGGATTTAAGAGTACTTCCTCTTTTTACTCAACCTCTAATCCCAGCCGCGGTTCTAAACCTCTCAGATCTCTCTTCATTCACCGACGCAACATCAAACTAACCATGGCCAACAAAGGTGAGGGTCCAGCCATTGGAATCGATCTCGGAACCACCTACTCATGCGTAGGTGTATGGCAGCATGATCGTGTTGAGATCATCGCCAACGACCAAGGTAACAGAACGACGCCGTCTTACGTAGGATTCACCGACACCGAACGTCTCATCGGTGATGCCGCTAAGAACCAGGTTGCCATGAACCCTATCAACACCGTTTTTGATGCCAAGAGATTGATTGGTCGTAGGTTCACCGATGCTTCTGTTCAGAGTGATACGAAATTATGGCCTTTTAAGGTTTTTTCTGGACCCGGTGATAAGCCAATGATTCAGGTTAGCTACAAGGGTGAAGATAAGCAGTTTTCCGCAGAAGAAATCTCTTCCATGGTACTTATGAAAATGCGTGAGATTGCTGAAGCTTATCTTGGCACTGCGATCAAGAATGCTGTTGTTACTGTCCCTGCTTACTTTAACGATTCTCAGCGTCAAGCTACCAAGGATGCTGGTGTTATTGCTGGTCTTAATGTCATGCGAATTATCAATGAGCCAACTGCTGCTGCTATTGCTTATGGTCTTGACAAGAAGGCTACCAGTGTCGGTGAGAAGAATGTCTTGATTTTTGATCTAGGGGGTGGTACCTTTGATGTCTCTTTACTAACCATTGAAGAGGGTATCTTTGAGGTGAAAGCCACAGCTGGGGACACTCATCTTGGAGGTGAGGATTTTGATAACAGGATGGTGAACCATTTTGTTCAGGAGTTCAAGAGAAAGAACAAGAAGGATATCAGTGGCAACCCAAGAGCACTTAGGAGGTTGAGGACTTCTTGTGAGAGGGCAAAGAGAACTCTATCGTCCACTGCTCAAACCACCATTGAAATTGATTCCCTGTATGAAGGAATTGATTTCTATTCCACCATTACCCGTGCCAGGTTTGAAGAGCTTAACATGGATCTCTTCCGTAAGTGCATGGAACCAGTTGAGAAGTGTTTAAGAGATGCTAAGATGGACAAGAGGACTGTCCATGATGTTGTACTAGTTGGTGGTTCCACTAGAATTCCCAAGGTTCAACAACTTCTGCAGGATTTCTTCAATGGGAAGGAGCTCTGCAAGAGTATCAACCCAGATGAGGCTGTGGCTTATGGTGCTGCTGTTCAAGCTGCTATCTTGAGTGGTGAGGGTAACGAGAAGGTCCAAGATCTTCTCCTGCTTGATGTCACCCCACTCTCTCTCGGGTTGGAAACTGCTGGTGGGGTTATGACAGTCTTGATCCCCAGGAATACTACAATCCCAACAAAGAAAGAACAGGTTTTCTCAACCTATTCTGACAACCAGCCAGGTGTTTTGATCCAGGTTTATGAAGGTGAGAGAACAAGGACCAGAGATAACAATTTGCTGGGCAAATTTGAACTTTCAGGCATTCCTCCTGCACCCAGGGGTGTTCCTCAAATCACAGTGTGCTTCGACATTGATGCCAATGGTATCTTGAATGTCTCTGCCGAAGACAAGACTACTGGCCAAAAGAACAAGATCACCATTACCAACGATAAGGGTAGATTGTCAAAGGAAGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAGTCTGAAGATGAAGATCATAAGAAGAAGGTGGAGGCAAAGAATGCATTGGAGAACTACGCATACAACATGAGGAATACCGTGAAGGACGAGAAGATTGGAGGAAAACTTGACCCAGCTGACAAGAAGAAGATCGAGGATGCTGTCGAGCAGACCATCCAGTGGCTAGACACCAACCAACTTGGAGAGGCAGACGAGTTTGAGGACAAAATGAAGGAATTGGAAAGCCTCTGTAACCCTATCATAGCCAAGATGTACCAGGGTGGTGCTGGTCCAGACATGGGAGGTGCAATGGACGATGATGTTCCTGCTGGTGGAAGTGGTGCTGGTCCCAAGATCGAGGAAGTAGACTAA 2220 0.4604 MLHCDRATKGGEDLGDMTQCVLQEGSLYLKMQPGGGVVVKCGDSYDDDVSLRKEETRGFKSTSSFYSTSNPSRGSKPLRSLFIHRRNIKLTMANKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFTDASVQSDTKLWPFKVFSGPGDKPMIQVSYKGEDKQFSAEEISSMVLMKMREIAEAYLGTAIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEDHKKKVEAKNALENYAYNMRNTVKDEKIGGKLDPADKKKIEDAVEQTIQWLDTNQLGEADEFEDKMKELESLCNPIIAKMYQGGAGPDMGGAMDDDVPAGGSGAGPKIEEVD 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00768 739 ProSitePatterns Heat shock hsp70 proteins family signature 3. 431 445 IPR018181 -
Phco6g00768 739 Coils Coil 612 632 - -
Phco6g00768 739 SUPERFAMILY Actin-like ATPase domain 99 282 IPR043129 -
Phco6g00768 739 Gene3D - 283 457 - -
Phco6g00768 739 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 483 640 IPR029047 -
Phco6g00768 739 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 482 635 IPR029047 -
Phco6g00768 739 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 634 715 IPR029048 -
Phco6g00768 739 FunFam Heat shock 70 kDa protein 630 739 - -
Phco6g00768 739 PANTHER HEAT SHOCK PROTEIN 70KDA 100 674 IPR013126 GO:0005524|GO:0140662
Phco6g00768 739 Gene3D - 101 475 - -
Phco6g00768 739 FunFam Heat shock protein 70 101 287 - -
Phco6g00768 739 Gene3D - 636 739 IPR029048 -
Phco6g00768 739 Pfam Hsp70 protein 100 709 IPR013126 GO:0005524|GO:0140662
Phco6g00768 739 MobiDBLite consensus disorder prediction 711 739 - -
Phco6g00768 739 SUPERFAMILY Actin-like ATPase domain 289 479 IPR043129 -
Phco6g00768 739 FunFam Heat shock 70 kDa protein 288 351 - -
Phco6g00768 739 FunFam heat shock 70 kDa protein-like 162 217 - -
Phco6g00768 739 FunFam Heat shock cognate 70 kDa protein 2 410 457 - -
Phco6g00768 739 FunFam Heat shock 70 kDa 482 636 - -
Phco6g00768 739 PRINTS 70kDa heat shock protein signature 428 444 - -
Phco6g00768 739 PRINTS 70kDa heat shock protein signature 237 257 - -
Phco6g00768 739 PRINTS 70kDa heat shock protein signature 568 584 - -
Phco6g00768 739 PRINTS 70kDa heat shock protein signature 99 112 - -
Phco6g00768 739 PRINTS 70kDa heat shock protein signature 460 480 - -
Phco6g00768 739 PRINTS 70kDa heat shock protein signature 127 139 - -
Phco6g00768 739 PRINTS 70kDa heat shock protein signature 149 157 - -
Phco6g00768 739 PRINTS 70kDa heat shock protein signature 300 310 - -
Phco6g00768 739 PRINTS 70kDa heat shock protein signature 487 506 - -
Phco6g00768 739 ProSitePatterns Heat shock hsp70 proteins family signature 1. 103 110 IPR018181 -
Phco6g00768 739 ProSitePatterns Heat shock hsp70 proteins family signature 2. 294 307 IPR018181 -
Phco6g00768 739 Gene3D - 162 217 - -
Phco6g00768 739 Gene3D Actin; Chain A, domain 4 326 409 - -
Phco6g00768 739 CDD HSPA1-2_6-8-like_NBD 100 478 - -
Phco6g00768 739 FunFam Heat shock 70 kDa 326 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00768 Phco-Chr6 7630247 7634426 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01941 2 50077272 50079851 Phco6g00768 6 7630247 7634426 ECH
Phco6g00768 6 7630247 7634426 Phco2g01941 2 50077272 50079851 ECH
Phco6g00768 6 7630247 7634426 Phco6g00768 6 7630247 7634426 ECH
Phco2g01941 2 50077272 50079851 Phco6g00768 6 7630247 7634426 PCT