Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01941 ATGGCCGGTAAAGGTGAGGGTCCTGCTATCGGAATCGATCTTGGAACCACGTACTCTTGTGTCGGGGTCTGGCAACATGACCGCGTTGAAATCATTGCCAACGACCAAGGCAACAGAACGACGCCGTCTTACGTTGGATTCACCGACACCGAGCGTCTCATTGGTGACGCTGCCAAGAACCAAGTCGCCATGAACCCTATCAACACCGTCTTCGATGCAAAGAGGTTGATTGGTCGTAGATTCACTGATGCCCCTGTTCAGAGTGATATCAAATTGTGGCCTTTTAAGGTCATTGCTGGTCCTGCTGATAAGCCAACAATTGTAGTTAACTACAAGGGTGAGGAGAAACAATTTGCTGCTGAAGAAATCTCTTCCATGGTACTCATGAAGATGCGTGAGATTGCTGAGGCTTACCTGGGCTCTACAGTAAAGAATGCTGTTGTCACTGTTCCTGCTTACTTCAATGATTCTCAGCGTCAAGCTACTAAGGATGCTGGTGTTATTGCTGGTCTTAATGTCATGCGTATTATCAATGAGCCTACCGCAGCTGCCATTGCATATGGTCTCGACAAGAAAGCAACAAGTGTGGGTGAGAAGAATGTGTTGATCTTTGATCTTGGTGGTGGGACATTCGATGTTTCTTTACTTACTATCGAGGAGGGCATCTTTGAGGTGAAAGCCACAGCTGGTGACACACATCTTGGTGGAGAGGATTTTGATAACAGGATGGTGAACCACTTTGTGCAAGAGTTTAAGAGAAAGAACAAGAAGGACATTAGTGGAAACCCCAGAGCACTTAGAAGGTTGAGGACCTCATGTGAGAGGGCTAAGAGAACCTTATCATCTACTGCCCAGACTACCATTGAAATTGATTCTCTATATGAGGGAATTGATTTCTACTCCACCATTACTCGCGCCAGATTTGAGGAGCTCAATATGGATCTCTTCAGAAAATGTATGGAACCAGTGGAGAAATGTCTAAGGGATGCTAAGATGGACAAGAAAAGTGTGGATGATGTTGTCCTTGTTGGTGGTTCTACCAGAATTCCCAAGGTTCAGCAACTACTCCAGGACTTCTTTAATGGAAAGGAGCTTTGCAAGAGCATTAACCCTGACGAGGCTGTTGCCTATGGTGCGGCTGTTCAGGCTGCGATCTTAAGTGGTGAGGGCAATGAGAAGGTTCAAGATCTTCTCCTTCTTGATGTTACTCCTCTATCTCTTGGGTTGGAGACGGCCGGTGGTGTGATGACTGTCCTGATCCCTAGGAACACCACTATTCCAACAAAGAAGGAGCAGGTTTTTTCAACATACTCTGATAACCAGCCTGGTGTGTTGATCCAGGTCTTTGAGGGTGAGAGAGCAAGGACCAGAGATAACAATTTGTTGGGCAAATTTGAACTTTCTGGTATTCCTCCTGCTCCCAGGGGTGTTCCACAAATTACAGTGTGCTTTGACATTGATGCCAATGGTATTTTGAATGTCTCTGCTGAAGATAAAACCACTGGCCAGAAAAATAAGATCACTATCACCAATGACAAGGGTAGACTGTCGAAGGATGATATCGAGAAGATGGTTCAAGAGGCGGAGAAGTACAAATCCGAGGATGAAGAGCATAAGAAGAAGGTTGAGGCCAAGAACGCCTTGGAAAACTATGCGTACAATATGAGGAACACAGTGAAGGATGAGAAGATTGGTGGCAAACTGGATCCTGCCGACAAGAAGAAGATTGAGGACGCTATTGAGCAAGCTATCCAATGGCTGGACAGCAACCAGCTTGCAGAGGCAGATGAGTTTGAGGACAAAATGAAGGAATTGGAAAGCATCTGCAATCCTATCATTGCCAAAATGTATCAGGGTGGTGCTGGTCCAGACATGGGTGGTGCTCCTCCGGCAGATACTGATTATACTCCTTCTGGTGGAAGTGGCGCTGGCCCCAAGATTGAGGAAGTGGACTAA 1956 0.4617 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFTDAPVQSDIKLWPFKVIAGPADKPTIVVNYKGEEKQFAAEEISSMVLMKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKKSVDDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGGKLDPADKKKIEDAIEQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDMGGAPPADTDYTPSGGSGAGPKIEEVD 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01941 651 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524|GO:0140662
Phco2g01941 651 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Phco2g01941 651 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Phco2g01941 651 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Phco2g01941 651 PRINTS 70kDa heat shock protein signature 8 21 - -
Phco2g01941 651 PRINTS 70kDa heat shock protein signature 337 353 - -
Phco2g01941 651 PRINTS 70kDa heat shock protein signature 396 415 - -
Phco2g01941 651 PRINTS 70kDa heat shock protein signature 209 219 - -
Phco2g01941 651 PRINTS 70kDa heat shock protein signature 58 66 - -
Phco2g01941 651 PRINTS 70kDa heat shock protein signature 146 166 - -
Phco2g01941 651 PRINTS 70kDa heat shock protein signature 369 389 - -
Phco2g01941 651 PRINTS 70kDa heat shock protein signature 477 493 - -
Phco2g01941 651 PRINTS 70kDa heat shock protein signature 36 48 - -
Phco2g01941 651 FunFam Heat shock protein 70 10 196 - -
Phco2g01941 651 Gene3D - 192 366 - -
Phco2g01941 651 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Phco2g01941 651 FunFam Heat shock 70 kDa 391 545 - -
Phco2g01941 651 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Phco2g01941 651 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Phco2g01941 651 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Phco2g01941 651 Gene3D Actin; Chain A, domain 4 235 318 - -
Phco2g01941 651 FunFam Heat shock 70 kDa protein 71 126 - -
Phco2g01941 651 FunFam Heat shock 70 kDa protein 539 651 - -
Phco2g01941 651 FunFam Heat shock 70 kDa 235 318 - -
Phco2g01941 651 MobiDBLite consensus disorder prediction 618 651 - -
Phco2g01941 651 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Phco2g01941 651 Gene3D - 71 126 - -
Phco2g01941 651 FunFam Heat shock 70 kDa protein 197 260 - -
Phco2g01941 651 Coils Coil 521 541 - -
Phco2g01941 651 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Phco2g01941 651 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Phco2g01941 651 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Phco2g01941 651 Gene3D - 10 384 - -
Phco2g01941 651 Gene3D - 546 619 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01941 Phco-Chr2 50077272 50079851 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01941 2 50077272 50079851 Phco6g00768 6 7630247 7634426 ECH
Phco2g01941 2 50077272 50079851 Phco2g01941 2 50077272 50079851 ECH
Phco6g00768 6 7630247 7634426 Phco2g01941 2 50077272 50079851 ECH
Phco2g01941 2 50077272 50079851 Phco6g00768 6 7630247 7634426 PCT