Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00756 ATGATTCAAGTGTGTTACAATTTTGTGGTGTCATTGTACATTATATTAAGTCTCTTGATAGATATTTTGGTGGCTGATGTTTGGACATTATACTTGTGCTTTCCTTCTACACCACTCCTGAATCAGGAGAAGAAACCCATAAACATAAACATAGTTTTCAAATCATTTTCATCATCTTCCACCACCTCCTTCTCCGTCAATTCAAGTCCCCACTCCTCCCCTTCACTCTCTTTCTCTCTCCTACCGCAAGCTCTTCCCTCAATTCCACTCCTCCGCCAAATCCACCATCTCACTGTCACTATTAAATCACACATTGGCTTTATTTACACTCGCATTTTCATTCATTTGCATTTCGAAGCTTCTCGGCGCCGTTACCGCTCTCCATGCGGTGCTGAATCCGGGAACGGTTGTTCCAGATCTGAACGCGGCCGCGAAAGATCCGAACGCTGCGCGATGGAGGAAGCGCTTGAGCTCGCACGCGCCAAGGACGCCAAGGAGAGGATGGCCGGCGTGGAGCGCCTCCATGAGGTTCTCGAAGCTTCTAGGAGGAGCCTCAGTTCCGCCGAAGTCGCCTCGCTCGTCGAATGCTGCCTGGATCTCTTGAAGGACAGCAGCTTCAAGGTCTCCCAGGGCGCGCTTCAGGCGCTCGACTCCGCTGCCGTTCGCGCTGGCGACCACTTCAAGCTCCACTTCAATGCGCTCGTTCCCGCCGTCGTTGAACGGTTAGGCGACGCCAAACAGCCCGTCCGCGACGCTGCCAGACGCCTCTTGCTCACTCTCATGGAGGTTTCATCTCCCACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGACGTGCAAAAGCTGGAGAATTCGAGAGGAATTTGTGCGAACTGTCACATCTGCTATTGGTCTATTTTCAGCGACTGAGCTTCCTCTTCAACGTGCTATTCTTCCTCCTATTCTTCAGTTGCTTAATGATCTGAATCCTGCTGTTAGGGAAGCTGCTATTTTGTGCATTGAGGAGATGTATGCACAAGCTGGGTCCCAATTTCGTGATGAACTTCAGCGTCACAATCTTCCTTCATCTCTGGTGAAAGCCATTAATGCCAGACTAGAGGGAATTCAACCAAAAGTTCAATCTTCAGATGGTATTTCTAGTGGTTATATTGCTGGGGAAATTAAGCCGGTGGGTGTTAATCCCAAAAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGAGCTCTCTTTTTGGAGGAGAAGGTGATGTTACGGAGAAAGTCATAGACCCCATCAAGGTGTATTCAGAGAAGGAGTTACTCAGAGAAATTGATAAGATTGCAGCTACCCTTGTACCAGAGAAGGACTGGTCAATTCGTATTGCTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTACTGATTATCCATGTTTCTTTGGACTCCTGAAGCAGCTTGTTGGGCCTTTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTGAAGCAGGTTTGCCATCTATTATGCTTTTTGTCAAAGGACCTCTTGGGTGATTTTGAAGCATGTGCTGAACTATTCATACCAGTCCTTTTGAAGCTAGTTGTGATTACTGTGCTTGTAATTGCAGAATCTGCAGATAACTGCATAAAAACGATGTTGCGTAACTGCAAAGTTGCTCGTGTGCTTCCTCGGATAGCTGATTGTGCAAAAAATGATCGCAATGCTGTACTTCGTGCAAGGTGTTGTGATTATGCACTTTTGATTCTAGAACATTGGCCTGATGCAGCAGAAATACAACGATCGGCTGATTTATATGAGGATATGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTGCGGTCTACTGCAAGGATGTGTTACAGAATGTTTGCAAAGACTTGGCCTGAACGTTCCCGCCGCCTATTTTCATCCTTTGACCCTGCTATTCAAAGGTTAATAAATGAAGAAGATGGAGGAATGCATAGGAGACAGGCATCGCCTTCTGTTCGTGATAGAGGTGCATTGATATCAATGGCTAGTCAAGCTTCAGCTCCCTCTAGTCTAACTGGTTATGGAACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCGTCAGGGACTTCTATTGCCTCTGGCGTTCTTTCACAAGCCAAGTCACTCGGTAAAGGTACTGAACGCAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGGGGTTTGGATTTGTCTGATAAGCATGGTTCATCTGTTCTCCGGTCTTCGAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCACCATTCCCTGCTGCTGTCTCGGCATCTAATCATCTGACTAACACTTTAATGACGGAGTCAACTGCTTCTGGTGCCAATAAAGGTAGTAACCGCAATGGTGGTTTGGGTTTGTCTGACATAATTACCCAAATTCAAGCTTCCAAAGACTCTGGCAGGTTATCATATAGTACTAATGTTGGTACTGAGCCTTTATCAGCATATTCATCATACTCAAGTAAAAGAGCTTCTGATAAATTACAAGAAAGAAGTTCTGTTGATGAAAATAGTGACATCAGGGACACTAGACGATATATGAACCCCAACGTAGATAGGCAGTATATGGATACCCATTACCGGGATGCCAACTTTAGGGACTCACAGAATAGTTATGTGCCTAATTTCCAGAGGCCACTATTGAGAAAGAATGTAGCTGGACGTGTCTCTGCTGGCAGCAGGAGGAGTTTGGATGATAGCCAATTATCTCTTGGAGAGATGTCAATTTATGCAGATGGACCAGCATCTCTTCATGAAGCTCTGAGTGAAGGGCTTAGCTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCACTCCTTGTTGCAGCAAGGTCAAAAGGGAATTCAAGAAGTAGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTTCAGCATTTGGATGATCCCCACCATAAAGTTGCACAGGCTGCTCTCTCCACACTTGCAGATATTATTCTGGCATGTCGCAAGCCCTTCGAGGGCTACATGGAACGGATGTTACCCCATGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTAGTTAGGCAAGCCTGCTCAATGAATTTGGAAGTTGTTAGCAAAACATACAGCATAGATTCTCTCTTGCCTGCATTGCTACGTGCACTAGATGAGCAAAGGTCTCCAAAGGCAAAATTGGCTGTTATTGAGTTTGCAGTAAGTTCCTTTAACAAGCATTCAATGAATCCAGAGGGTGCTGCAAATATTGGCATTCTAAAATTATGGCTTTCCAAGTTAGTTCCATTGGTTCACGATAAAAATACAAAACTTAAAGAAGCAGCTATTACATGCATAATATCGGTGTACTCTCACTTTGATTCATCAGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGACGAACAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACCCCTCGCATTGAAGTAGACTTAATGAATTATCTGCAGAACAAGAAAGAGCGACGTTCCAAGTCTTCCTATGATTCATCTGATGTAGTGGGAGCATCCTCTGAAGAGGGATATACTGGTTTGTCTAGGAAAGCTCATTACATTGGAAGGTATTCAGCTGGTTCACTGGATAGTGATGGTGGCAGGAAGTGGAGTTCCCAAGATTCCTCTCTGATTAAAGCCAATCTCGGCCATGCAGCTTCTGATGAATCTGAGGAACATACTGATTCTAATAGTGGTATTATTGGTTTAAAAACTAAAGATCTTGCTTATACAATGAGTCAAAACTTTGGCTTTCAAACTAGCCAAGTTGGACATGTGGACAGTAGCATGAATTTTGAAGGTCTGTCATCTGATCTGGATATTAATGGTCTGATGTCATCAGAATATTTAAATATTGCTGAAGACTTTGGACTTGACAAAGAATATCCCTCTGAATTGAACCATAATCATCAGTCAGTTGAAGGTGTGAAAGTAAACTACACGACTGACACTGGACCCAGTATTCCTCAGATTCTTCATATGATATGCAGTGAGGGTGATGGAAGCCCTATTTTGAGCAAGCAGACTGCACTTCAACAGCTAGTTGAAGTGTCTATAGCTAATGATCATTCCGTTTGGACTCTGTACTTCAATCAGATTTTGACAGTTGTGCTTGAAGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTGCTCTGTCTCTGATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAGACTTCTGTTGAGCTGGTTGTTGAAAAACTGCTTAATGTTGCAAAGGATATTGTTCCCAAGGTCTCAAACGAAGCAGAGCAATGCCTCACCAGCGTTTTATCTCAGAATGATCCGTTTAGATGTTTAAGTGTTATTGTTCCTCTACTGGTTACTGAGGATGAGAAAACTCTTGTCACTAGCATAAATTGCTTAACAAAGCTTGTGGGGCGTCTTTCTCAAGAGGAACTAATGGCTCAGTTACCCTCTTTTCTGCCTGCTTTGTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGACCGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTTTTGCCATATTTGGAAGGGCTTAATAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAGGCAAGGACAGGAAAAACAATTGATACAACTCAAGTCTAG 4758 0.4355 MIQVCYNFVVSLYIILSLLIDILVADVWTLYLCFPSTPLLNQEKKPININIVFKSFSSSSTTSFSVNSSPHSSPSLSFSLLPQALPSIPLLRQIHHLTVTIKSHIGFIYTRIFIHLHFEASRRRYRSPCGAESGNGCSRSERGRERSERCAMEEALELARAKDAKERMAGVERLHEVLEASRRSLSSAEVASLVECCLDLLKDSSFKVSQGALQALDSAAVRAGDHFKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTCKSWRIREEFVRTVTSAIGLFSATELPLQRAILPPILQLLNDLNPAVREAAILCIEEMYAQAGSQFRDELQRHNLPSSLVKAINARLEGIQPKVQSSDGISSGYIAGEIKPVGVNPKKSSPKAKSSSRESSLFGGEGDVTEKVIDPIKVYSEKELLREIDKIAATLVPEKDWSIRIAAMQRIEGLVLGGATDYPCFFGLLKQLVGPLSTQLSDRRSSIVKQVCHLLCFLSKDLLGDFEACAELFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCDYALLILEHWPDAAEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGMHRRQASPSVRDRGALISMASQASAPSSLTGYGTSAIVAMDRSSSLSSGTSIASGVLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHGSSVLRSSSLDLGVDPPSSRDPPFPAAVSASNHLTNTLMTESTASGANKGSNRNGGLGLSDIITQIQASKDSGRLSYSTNVGTEPLSAYSSYSSKRASDKLQERSSVDENSDIRDTRRYMNPNVDRQYMDTHYRDANFRDSQNSYVPNFQRPLLRKNVAGRVSAGSRRSLDDSQLSLGEMSIYADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIILACRKPFEGYMERMLPHVFSRLIDPKELVRQACSMNLEVVSKTYSIDSLLPALLRALDEQRSPKAKLAVIEFAVSSFNKHSMNPEGAANIGILKLWLSKLVPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKERRSKSSYDSSDVVGASSEEGYTGLSRKAHYIGRYSAGSLDSDGGRKWSSQDSSLIKANLGHAASDESEEHTDSNSGIIGLKTKDLAYTMSQNFGFQTSQVGHVDSSMNFEGLSSDLDINGLMSSEYLNIAEDFGLDKEYPSELNHNHQSVEGVKVNYTTDTGPSIPQILHMICSEGDGSPILSKQTALQQLVEVSIANDHSVWTLYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMETSVELVVEKLLNVAKDIVPKVSNEAEQCLTSVLSQNDPFRCLSVIVPLLVTEDEKTLVTSINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTGKTIDTTQV 1585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00756 1585 SMART TOG_3 136 375 IPR034085 -
Phco6g00756 1585 SMART TOG_3 931 1179 IPR034085 -
Phco6g00756 1585 SMART TOG_3 1358 1577 IPR034085 -
Phco6g00756 1585 SMART TOG_3 433 665 IPR034085 -
Phco6g00756 1585 Pfam HEAT repeat 311 338 IPR000357 GO:0005515
Phco6g00756 1585 Gene3D - 1369 1577 IPR011989 -
Phco6g00756 1585 Gene3D - 147 373 IPR011989 -
Phco6g00756 1585 MobiDBLite consensus disorder prediction 762 784 - -
Phco6g00756 1585 Pfam CLASP N terminal 953 1147 IPR024395 -
Phco6g00756 1585 Pfam CLASP N terminal 436 651 IPR024395 -
Phco6g00756 1585 Gene3D - 418 660 IPR011989 -
Phco6g00756 1585 ProSiteProfiles HEAT repeat profile. 311 349 IPR021133 -
Phco6g00756 1585 MobiDBLite consensus disorder prediction 852 875 - -
Phco6g00756 1585 MobiDBLite consensus disorder prediction 394 414 - -
Phco6g00756 1585 ProSiteProfiles HEAT repeat profile. 234 272 IPR021133 -
Phco6g00756 1585 PANTHER CLASP 183 1571 - -
Phco6g00756 1585 SUPERFAMILY ARM repeat 443 1575 IPR016024 -
Phco6g00756 1585 FunFam Protein peg1 417 664 - -
Phco6g00756 1585 MobiDBLite consensus disorder prediction 841 875 - -
Phco6g00756 1585 Gene3D - 947 1171 IPR011989 -
Phco6g00756 1585 Coils Coil 161 181 - -
Phco6g00756 1585 MobiDBLite consensus disorder prediction 398 412 - -
Phco6g00756 1585 SUPERFAMILY ARM repeat 148 553 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00756 Phco-Chr6 7500951 7519885 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00756 6 7500951 7519885 Phco6g00756 6 7500951 7519885 ECH
Phco2g01934 2 50002757 50014994 Phco6g00756 6 7500951 7519885 PCT