Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00743 ATGTGGAACCTCTGCACTGCCGTTTCCAATGCTTCTTCAACCTTCACATTCAGCGTTCAACCTCACCCACTTCTCAACTTCTTCAATAGAAGGAGAAGGTCTCGCTGCAGGGTCACCATGTCCTCCCATACTCAAAACGCCGTCGTTGTGGGATGTGGAGGGGTGTCTATCGATTTCTTGGCCACCGTGGCCGCTTACCCTAAGCCAGATGACAAAATCAGAACCACCAATTTGAAGGTTCAAGGAGGTGGCAATGCTGGAAATGCCTTAACCTGCCTTGCTCGCTTGGGCCTAAACCCAAGGCTTATTTCCAAGGTTGCTGATGACAGTCAAGGTAGGGGTATAATAGACGAGCTACAAGCTGATGGTGTAGATACATCCTTTATAGTGGTTTCTAAGGAGGGAACATCACCATTTACATATATTATTGTCGACAACCAAACAAAGACCCGTACTTGTATACATACCCCAGGCTATCCTCCAATGATACCAGACAACCTGTCAAAATCAAGTTTGTTATCTGCATTGGATGGAGCTAAAATTGCTTATTTTGACGGCAGGTTGCCGGACACTGCTCTAGTTGTTGCCCAAGAGGCAGTTAGAAAGAATATACCCATCTTAATTGATGCAGAAAGACCAAGGGAAGGGTTGGACGATCTCCTAAAACTAGCTGATTATGTTGTATGCTCAGCGAAGTTTCCAAAAGCATGGACAGAGGCATCTACTGTTCCACAAGCACTTGTTTCTATGCTTTTAATGTTGCCCAACATAAAATTTGTGATTGTCACTTTGGGAAAAGAGGGCTGCATAATGCTGGATAGAAGGGTTGATGCAGGACCTTCTACGGAAGAAGTGAATGTAGACAGCTTATTGGAATCATTGGAGTTAAAAAGGAATAAGAGTGTATCCATTCCAACCTGCATACCATCATCAGTGGCAAAATTGAAGGCAGAGGGGATAGGAACAGTTAGTGGGAAGTTATATGTTGGAACAGCCGAGAGTATTCCACCATCAGAGCTCGTTGATACCACTGGTGCCGGGGATGCTTTTATTGGGGCTGTAGTCTATGCTATCTGTGCCAAGTTTACACCAGAGACAATGCTATCCTTTGCTGCTAATGTGGCAGGTGCCAAGTGCAGGGATCTAGGAGCACGGAGTGGTCTTCCTTACCGTGCAGATCCACGCTTGGAATCCTTTATATTGGAGAAATTAAGTAGTTCATCTTAA 1227 0.4499 MWNLCTAVSNASSTFTFSVQPHPLLNFFNRRRRSRCRVTMSSHTQNAVVVGCGGVSIDFLATVAAYPKPDDKIRTTNLKVQGGGNAGNALTCLARLGLNPRLISKVADDSQGRGIIDELQADGVDTSFIVVSKEGTSPFTYIIVDNQTKTRTCIHTPGYPPMIPDNLSKSSLLSALDGAKIAYFDGRLPDTALVVAQEAVRKNIPILIDAERPREGLDDLLKLADYVVCSAKFPKAWTEASTVPQALVSMLLMLPNIKFVIVTLGKEGCIMLDRRVDAGPSTEEVNVDSLLESLELKRNKSVSIPTCIPSSVAKLKAEGIGTVSGKLYVGTAESIPPSELVDTTGAGDAFIGAVVYAICAKFTPETMLSFAANVAGAKCRDLGARSGLPYRADPRLESFILEKLSSSS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00743 408 PRINTS Ribokinase signature 260 271 IPR002139 GO:0016301
Phco6g00743 408 PRINTS Ribokinase signature 51 72 IPR002139 GO:0016301
Phco6g00743 408 PRINTS Ribokinase signature 78 97 IPR002139 GO:0016301
Phco6g00743 408 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 33 400 - -
Phco6g00743 408 SUPERFAMILY Ribokinase-like 49 393 IPR029056 -
Phco6g00743 408 Gene3D - 48 386 IPR029056 -
Phco6g00743 408 CDD ribokinase_group_B 48 390 - -
Phco6g00743 408 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 342 355 IPR002173 GO:0016301
Phco6g00743 408 Pfam pfkB family carbohydrate kinase 53 274 IPR011611 -
Phco6g00743 408 Pfam pfkB family carbohydrate kinase 328 389 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00743 Phco-Chr6 7357290 7362530 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01926 2 49862340 49867560 Phco6g00743 6 7357290 7362530 PCT