Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01926 ATGTCCCGTGACTGCGAGAACACCGTAGTTGTGGGGTGTGGAGCGGTGTCGGTGGATTTCTTGGCTACTGTTGCAGCTTTTCCAAAACCAGATGACAAAATCAGAAGCACTTCCTTCAAGGTTCAAGGAGGTGGCAATGCAGGCAATGCTTTAACCTGTGCCTCTCGCTTAGGACTCAAACCAAGAATAATTTCCAAGGTTGCAGATGATACTCAAGGCAGGGAAGTATTACGTGAGCTAGAGGCTGATGGGGTAGATACATCCTTCATGGCTGTTTCTCAGGAGGGCACTTCACCATTTACGTATGTCATTGTGGACAGCCAAACGCAGTCCCGTACTTGTATACATACCCCAGGATATCCACCGATGAAGCCAGTTGATCTTTCCGAGTCAAGTTTGTTAACTGCATTGAATGGAGCAAAAATTGTTTATTTTGATGGGAGATTGCATGAAACGGCTCTAGTTGTTGCACATGAGGCAGTTAAGAAGAATATACCTATCTTAATGGATGCAGAAAGGCTGAGAGAAGGGTTGGATGATCTCCTGCAATTAGCGGATTATGTTGTGTGCGCTGCACAGTTTCCACAGGCATGGACAGAGGCATCAACAGTTCCTAAAGCATTAGTTTGTATGCTTTTAAGATTGTCCAACATCAAATTTGTGATTGTAACTTTGGGAAAAGATGGTTGCATAATGCTGGAGAGAAGTTTTAATGAGGGTCCTTCCACTGAAGAAATGGATGTTGACCAATTACTGGAATCCCTGGAGATGAGAAAGAACAGAAGGACACACATCCCAACCTGCATATCATCATCAGTGACAAAATTGCATGCAGAAGGTATAGGAACAGTTTTTGGGAAGTTATACGTTGGAACAGCTGAGAATGTACCTCCATCAGAGCTTATTGATACAACTGGTGCTGGAGATGCATTTATTGGATCTATTCTCTATGCTATCTGTGCCAACTTCACGCCAGAGAAAATGCTGTGTTTTGCTGCTACTGTGGCAGCTTCCAAGTGCCGAGCTATAGGAGCAAGAACTGGTCTCCCTTACCACACGGATCCATGCCTGGCATCCTTCATGAACTAG 1089 0.4454 MSRDCENTVVVGCGAVSVDFLATVAAFPKPDDKIRSTSFKVQGGGNAGNALTCASRLGLKPRIISKVADDTQGREVLRELEADGVDTSFMAVSQEGTSPFTYVIVDSQTQSRTCIHTPGYPPMKPVDLSESSLLTALNGAKIVYFDGRLHETALVVAHEAVKKNIPILMDAERLREGLDDLLQLADYVVCAAQFPQAWTEASTVPKALVCMLLRLSNIKFVIVTLGKDGCIMLERSFNEGPSTEEMDVDQLLESLEMRKNRRTHIPTCISSSVTKLHAEGIGTVFGKLYVGTAENVPPSELIDTTGAGDAFIGSILYAICANFTPEKMLCFAATVAASKCRAIGARTGLPYHTDPCLASFMN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01926 362 CDD ribokinase_group_B 9 351 - -
Phco2g01926 362 Gene3D - 9 347 IPR029056 -
Phco2g01926 362 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 5 361 - -
Phco2g01926 362 Pfam pfkB family carbohydrate kinase 12 237 IPR011611 -
Phco2g01926 362 Pfam pfkB family carbohydrate kinase 292 350 IPR011611 -
Phco2g01926 362 PRINTS Ribokinase signature 39 58 IPR002139 GO:0016301
Phco2g01926 362 PRINTS Ribokinase signature 221 232 IPR002139 GO:0016301
Phco2g01926 362 PRINTS Ribokinase signature 12 33 IPR002139 GO:0016301
Phco2g01926 362 SUPERFAMILY Ribokinase-like 10 352 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01926 Phco-Chr2 49862340 49867560 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01926 2 49862340 49867560 Phco2g01926 2 49862340 49867560 ECH
Phco2g01926 2 49862340 49867560 Phco6g00743 6 7357290 7362530 PCT