Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00731 ATGTTTGTTACACACCAAACATTTTTTGGACCACAATTTTATAGCCCTTTATGCTTTAGAGAGAGTGCTGTTGTGAACGGCATCTCTCTTCTTCTGGCAATGGCAACTCTGCATTCTCTTGCATTGTCCTCTCCTTTCTCCAACTCACTTCACAAACCACGCTCATACTCAGTCCCATCTTCAATTGTCCATCAAAGTATAAACTCCTCATTCAATGGTCAAACTTTGCGCATGCCATGTTTGAGGTTACCTATGCTAACACAAAAGAGTGCCATGCACATGCCTGTTATCATGATGGCCAAACCAAAGATACAGTTCATCCAGGGAACTGATGAGCAAACAATTCCTGATGTGAGGCTGACCAAATCAAGGGATGGAACAAATGGCATGGCTATCTTCACGTTTGATCAACCTTCAGTTTTCGATTCTTCAGGTGAAATTGGTGATATCACTGGATTTTACATGATTGATGAAGAAGGAGTCCTTCAGTCAGTTGATGTAAATGCTAAATTTGTGAATGGTAAGCCCTCAATAATTGAAGCCAAGTACATAATGCGGAGTCCAAGGGAGTGGGATAGATTCATGAGATTCATGGAGCGATACTCTAATGCAAATGGTTTGCAATTCATCAAAAAATGA 639 0.4069 MFVTHQTFFGPQFYSPLCFRESAVVNGISLLLAMATLHSLALSSPFSNSLHKPRSYSVPSSIVHQSINSSFNGQTLRMPCLRLPMLTQKSAMHMPVIMMAKPKIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDITGFYMIDEEGVLQSVDVNAKFVNGKPSIIEAKYIMRSPREWDRFMRFMERYSNANGLQFIKK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00731 212 FunFam Photosystem II reaction center Psb28 protein 102 212 - -
Phco6g00731 212 Gene3D Photosystem II Psb28 99 212 IPR038676 -
Phco6g00731 212 PANTHER - 34 212 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
Phco6g00731 212 NCBIfam photosystem II reaction center protein Psb28 104 210 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
Phco6g00731 212 Hamap Photosystem II reaction center Psb28 protein [psb28]. 101 210 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
Phco6g00731 212 Pfam Psb28 protein 104 209 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00731 Phco-Chr6 7256819 7258414 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00731 6 7256819 7258414 Phco6g00731 6 7256819 7258414 ECH
Phco2g01902 2 49596212 49597043 Phco6g00731 6 7256819 7258414 PCT