Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00700 ATGAAAGGCGGGCACAAGAAGCCCTCCAAGTCCGACGCAAGCGATCCCGTGCTTGCGCCTTACGGCGCCGCCAACCGCAACTCGGCAGCGGCGCCCTCGCCCAATGTCGTCGTGAACCACGCCTCGCGCGGAGCCGGAGGTGCCGCGCCTCCTAGCTCCGGCACCGCGATGCCGCTCGTGCCGACCCCCGGGGCCATGGAGCCTCTGCCGCCTTTCCGCGATGCGCCGGCCTCTGAGCGGCAGAACCTCTTCCTCCGGAAGCTCCACGTCTGCTGCTACGTCCTTGACTTCTCCGACACGCTGAAGAACGTTAGAGAGAAGGAAATCAAGCGCCAAGCGCTGATGGACCTCGTCGACTTCATCCAATCTGGCTCCGGCAAGATGTCGGAGAATTGCCAGGAGGAGATGATCAGAATGATCTCCGTCAATATTTTCCGGTGCCTCCCTCCGGCGTCTCACGAGAACACCGGCCAGGAACCCACCGATCCTGAAGAGGAGGAACCAAGCTTGGATCCGACCTGGCCTCACCTTCAGCTCGTCTACGAGCTTCTCCTCAGATACGTGGTTTCCTCCGATACGGATACGAAAATTGCAAAACGATATATTGACCACTCCTTTGTTCTCAAATTGCTTGATTTGTTTGACTCCGAGGACCCACGGGAGAGGGAGTATTTGAAAACCATACTGCATCGTATATACGGGAAATTCATGGTGCATAGACCGTTTATTAGAAAGGCTATTAACAACATTTTTTATCGGTTCATATATGAGACTGAGCGACACTCTGGTATTGGGGAGCTTCTGGAGATTCTTGGGAGCATTATTAATGGGTTTGCGCTGCCCATGAAGGAGGAGCACAAGCTGTTTCTGGTGAGGGCGCTTCTGCCTCTGCATAAGCCGAAATCGGTGGCCATGTACCACCAGCAGTTGTCTTACTGCATTACTCAGTTTGTGGAGAAGGATTTCAAGCTGGCAGATACGGTGATTTGGGGGTTGTTGAAGTATTGGCCTCTTACCAATTGCCAGAAGGAGGTTCTCTTCCTTGGAGAACTGGAGGAAGTGCTGGAGGCCACGCAGGCCGCCGAGTTTCAAAAATGCATGGTTCCGCTTTTTAGACAGATTTCACGCTGCCTCAATAGCTCTCACTTTCAGGTTGCAGAACGGACCCTGTTTTTGTGGAACAATGAGCATATTGTGAGCTTAATTGCCCAAAACAGGACGGTGGTACTACCAATAATATTTGAAGCATTTGAGAAAAACATCTCCAGTCATTGGAATCAGGCAGTACATGGACTGACCGTGAATGTTCGGAAAATGTTCCTGGAAATGGATGCAGAATTGTATGAAGAGTGCCAGCGGCAGCACGCAGAGAAAGAGGCTAAAGCCCAAGATGTAGAAGAGCTGCGGGAACTTAACTGGAAGAGACTGGCAGATGCGGCTGCACAGAACGGAGTTGAGGACATGGTCACAACTTAG 1476 0.5244 MKGGHKKPSKSDASDPVLAPYGAANRNSAAAPSPNVVVNHASRGAGGAAPPSSGTAMPLVPTPGAMEPLPPFRDAPASERQNLFLRKLHVCCYVLDFSDTLKNVREKEIKRQALMDLVDFIQSGSGKMSENCQEEMIRMISVNIFRCLPPASHENTGQEPTDPEEEEPSLDPTWPHLQLVYELLLRYVVSSDTDTKIAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVAMYHQQLSYCITQFVEKDFKLADTVIWGLLKYWPLTNCQKEVLFLGELEEVLEATQAAEFQKCMVPLFRQISRCLNSSHFQVAERTLFLWNNEHIVSLIAQNRTVVLPIIFEAFEKNISSHWNQAVHGLTVNVRKMFLEMDAELYEECQRQHAEKEAKAQDVEELRELNWKRLADAAAQNGVEDMVTT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00700 491 MobiDBLite consensus disorder prediction 1 74 - -
Phco6g00700 491 PIRSF PP2A_B56 9 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Phco6g00700 491 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 69 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
Phco6g00700 491 Coils Coil 448 468 - -
Phco6g00700 491 MobiDBLite consensus disorder prediction 151 170 - -
Phco6g00700 491 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 76 479 - -
Phco6g00700 491 SUPERFAMILY ARM repeat 81 462 IPR016024 -
Phco6g00700 491 Gene3D - 76 479 IPR011989 -
Phco6g00700 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 43 484 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00700 Phco-Chr6 6969262 6975695 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00700 6 6969262 6975695 Phco6g00700 6 6969262 6975695 ECH
Phco2g02067 2 51424868 51431251 Phco6g00700 6 6969262 6975695 PCT