Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02067 ATGTTTAAGCGAATCATGAAGGGAGGGCAGAAGAAGCCCTCCAAGACGGACCCGAGCGATCCGTCCTCCTTCGGTCCGACGGCAACGGCCGCTGCTCCGGCAGTGGTTGTGCCGCCGCCTTCGGGGACCATAGAGCCGCTGCCGCTGTTCCTCGACGTGGCCGTGTTGGAGCGGCAGAACCTCTTTATCCGGAAGCTCCAGATATGCTGCCACGTTCTGGACTTTTCGGACACGCTGAAGAGCATTCGCGAGAAGGAAATAAAGAGACAGACGCTGATGGAGCTCGTGGATTTCATCCAATCGGGTTCGGGGAAGATAACGGATACGTGCCAGCAGGAGATGATCAAAATGGTGTCGGCCAATATCTTCCGGTGCCTCCCGCCGGCGTCGCACGAGAACACTGGCCAGGAAGCCACCGATCCGGAGGAGGAGGAGCCGTGCCTCGAGCCTGCGTGGCCGCACCTTCAGCTCGTCTACGAGCTTCTCCTCAGATACATCGTTTCATCTGATACTGACACGAAGGTTGCGAAACGGTACATTGATCATTCTTTTGTCCTCAAACTGCTTGATTTGTTTGACTCTGAGGACCCCCGTGAGCGTGAGTACTTAAAAACCATATTGCATCGCGTGTACGGGAAATTCATGGTTCATCGCCCCTTTATTAGGAAGGCCATTAACAACATATTTTTTCGGTTTATATATGAGACGGAGCGGCATAGCGGTATTGGGGAGCTTCTTGAGATTCTGGGGAGCATTATTAATGGCTTTGCTTTGCCGATGAAAGAAGAACATAAGCTGTTTCTATCGAGGGCGCTTCTGCCTCTGCATAAGCCCAAGCCGGTTTCGGTGTATCACCAGCAGTTGTCGTATTGCATTGCGCAGTTTGTGGAGAAGGATTTCAAGCTCGCGGATGCAGTTATTAGGGGCTTGTTGAAGTATTGGCCCGTGACTAATTGCCAGAAGGAGGTTCTCTTCCTTGGGGAACTGGAGGAGGTGCTGGAGGCCACGCAAGCTGCGGAATTCCAACGCTGCATGGTCCCTCTTTTTAGACAGGTTGCCCGCTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAACGAACTCTCTTTTTGTGGAATAATGAGCACATTGTCAGCTTAATTGCCCAAAACAGGACTGTAGTATTACCCATATTATTTGAAGCTTTGGAAAAAAATATCCAGAGTCATTGGAACCAGGCTGTTCACGGGCTGACCGTGAACGTTCAGAAAATGTTCCTAGAAATGGATGCAGAATTATTTGAAGAGTGTCAGAGACAGTATGCAGAGAGGGAGGCTAAAGCAGAAGATTTAGAAGAGCAGCGGGAATTGAATTGGAAAAGACTGGCAGATGCAGCTGCACAGAATGGGGTGGATATGGTCACAGCTTAG 1407 0.5068 MFKRIMKGGQKKPSKTDPSDPSSFGPTATAAAPAVVVPPPSGTIEPLPLFLDVAVLERQNLFIRKLQICCHVLDFSDTLKSIREKEIKRQTLMELVDFIQSGSGKITDTCQQEMIKMVSANIFRCLPPASHENTGQEATDPEEEEPCLEPAWPHLQLVYELLLRYIVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRVYGKFMVHRPFIRKAINNIFFRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLSRALLPLHKPKPVSVYHQQLSYCIAQFVEKDFKLADAVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRQVARCLNSSHFQVAERTLFLWNNEHIVSLIAQNRTVVLPILFEALEKNIQSHWNQAVHGLTVNVQKMFLEMDAELFEECQRQYAEREAKAEDLEEQRELNWKRLADAAAQNGVDMVTA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02067 468 SUPERFAMILY ARM repeat 59 440 IPR016024 -
Phco2g02067 468 PIRSF PP2A_B56 10 466 IPR002554 GO:0000159|GO:0007165|GO:0019888
Phco2g02067 468 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 36 461 IPR002554 GO:0000159|GO:0007165|GO:0019888
Phco2g02067 468 MobiDBLite consensus disorder prediction 1 27 - -
Phco2g02067 468 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 47 458 IPR002554 GO:0000159|GO:0007165|GO:0019888
Phco2g02067 468 Gene3D - 55 457 IPR011989 -
Phco2g02067 468 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 54 457 - -
Phco2g02067 468 Coils Coil 426 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02067 Phco-Chr2 51424868 51431251 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02067 2 51424868 51431251 Phco2g02067 2 51424868 51431251 ECH
Phco2g02067 2 51424868 51431251 Phco6g00700 6 6969262 6975695 PCT