Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00603 ATGTTAAGTTCCCGAAACATAAAAGTTGAGTGTTCAAAGATCCAGAGAGGAGCAACTAACAAGATGGAAGCGATTGAAGGGACGAGGGATGACATTTCATCCCAAGTGGGTCTGATTTGGAGCCAAGTGAAGGAGCCAGTGATGGTGCCACTGCTGAGAGTTGCAGTGTTTGTGTGCTTGGCCATGTCGTTGATGATGTTGGTGGAGAGGGTGTACATGGGGTTTGTGATTTGCTTGGTGAAGCTGTTCGGTAGAAGACCTGAGAAGCGTTACAAGTGGGAGTCTCTGAAGGAGGACGTTGAGTTGGGAAACTCTAGTTATCCCATGGTCTTGGTCCAAGTCCCAATGTACAACGAAAGAGAGGTTTATCAACTCTCAATCGGTGCTGCTTGTGGCCTTTCTTGGCCTTCAGACAGGATCATCATACAAATTCTTGATGATTCCACTGACCCATCAATCAAGGAGTTGGTGCAAATGGAATGTAGCAGATGGGCAAGCAAAGGAGTGAACATAAAGTACGAAGTGAGGGACAACAGAAATGGGTACAAAGCAGGGGCTCTGAAAGAAGGGATGAAACGTAGCTACGTGAAGCAATGTGACTATGTGGCCATATTTGACGCGGATTTTCAACCAGAACCTGATTTCGTCTGGCGAACTGTCCCATTCCTTGTCAACAACCCTGAACTTGGTCTCGTTCAGGCACGCTGGAAGTTTGTGAATGCCAATGAATGTTTGATGACCAGAATGCAAGAGATGTCACTGGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGCTTCAATGGAACTGCGGGTGTATGGAGAATTTCGGCGCTGAATGAGGCTGGGGGGTGGAAGGATAGAACCACAGTGGAAGATATGGACCTGGCTGTTCGTGCCAGTCTTAAAGGATGGAAATTCTTATACCTTGCCAATTTGAAGGTTAAAAATGAATTACCAAGTACTTTGAAGGCCTACCGCTACCAACAGCACAGGTGGTCTTGTGGACCAGCCAATCTTTTCAAGAAAATGGTCATGGAGATAATGCGGAACAAGAAAGTATCCTTGTGGAAGAAGATATATGTGGTTTACAGCTTCTTCTTCGTCCGGAAGGTCGTGGCCCACATAAACACTTTCGTGTTCTATTGCATTGTCTTACCTGCAACAGTTGTGGTGCCTGAGGTGGCGGTACCCAAGTGGGGTGCTGTTTATATCCCTTCCATCATCACACTCCTAAATGCTGTTGGAACTCCAAGGTCACTCCACTTACTGGTCTTCTGGATTCTCTTTGAGAATACCATGTCTCTGCATCGAACAAAGGCTACAATTATTGGTCTACTAGAGGCTAGCCGAGTGAATGAATGGATTGTCACTGAAAAACTTGGAGATGCTCTTAAGGGTAAAGGTGGGGGGGGTAAAGCGCCCAAGAAGATTCGTTTCAGGATTGGAGACAGAATTCACATGCTGGAACTTCTTGTTGGATTCTACCTTTTCTTCTGTGGCTGCTATGATCTTATGTTCGGGAAAAACCGGTTCTATATATTCCTATATATTCAATCAATTGCTTTCTTCATCATGGCATTTGGATATGTTGGCACTATCGTCCCCAACTCCTAA 1638 0.4542 MLSSRNIKVECSKIQRGATNKMEAIEGTRDDISSQVGLIWSQVKEPVMVPLLRVAVFVCLAMSLMMLVERVYMGFVICLVKLFGRRPEKRYKWESLKEDVELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQILDDSTDPSIKELVQMECSRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFVWRTVPFLVNNPELGLVQARWKFVNANECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLANLKVKNELPSTLKAYRYQQHRWSCGPANLFKKMVMEIMRNKKVSLWKKIYVVYSFFFVRKVVAHINTFVFYCIVLPATVVVPEVAVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENTMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKGKGGGGKAPKKIRFRIGDRIHMLELLVGFYLFFCGCYDLMFGKNRFYIFLYIQSIAFFIMAFGYVGTIVPNS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00603 545 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 31 540 - -
Phco6g00603 545 Pfam Glycosyl transferase family group 2 201 400 IPR001173 -
Phco6g00603 545 FunFam Glucomannan 4-beta-mannosyltransferase 9 99 327 - -
Phco6g00603 545 SUPERFAMILY Nucleotide-diphospho-sugar transferases 105 384 IPR029044 -
Phco6g00603 545 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 99 323 IPR029044 -
Phco6g00603 545 CDD CESA_CaSu_A2 108 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00603 Phco-Chr6 5944605 5950813 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00603 6 5944605 5950813 Phco9g00985 9 8214938 8220040 ECH
Phco6g00603 6 5944605 5950813 Phco6g00603 6 5944605 5950813 ECH
Phco2g02126 2 52026819 52031013 Phco6g00603 6 5944605 5950813 PCT