Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02126 ATGGATCGTTTTTCTTCCAGTACCATTATCCCTGAATCGTTCATAGGAGCCAAAGATGACCTCACCACACAGCTAGCATTGGTTTGGAACCAAATCAAAGCGCCATTGATTGTCCCGTTGCTGAGGCTAGCAGTGTTTCTGTGTTTGATCATGTCGGTTATGATGTTCATAGAGAGGGTCTACATGGGCGTTGTCATAACTCTGGTGAAGTTGTTCGTGAGAAAGCCCGAGAAACGTTACAAATGGGAGCCAATGAAGGACGACATAGAGTTGGGAAACTCTTCTTACCCAATGGTTCTCGTTCAAGTCCCCATGTACAACGAAAGAGAGGTTTATCAGCTCTCAATTGGTGCTGCGTGTGGGCTTTCTTGGCCTTCAGATAGGATCATCATACAGGTCCTTGATGACTCCACTGATCCAACAGTCAAGGAGTTAGTGCAGCTTGAATGTCAAAGATGGGCAAGCAAAGGGGTGAACATAAAGTATGAGGTTAGAGACAACAGGAATGGGTACAAAGCAGGGGCTCTCAAAGAAGGCATGAAGCGTAGCTACGTGAAACAATGTGATTGTGTTGCAATCTTTGACGCTGATTTTCAACCAGAGCCTGATTTCTTGTGGCGCACCGTCCCATTCTTAGTGCACAATCCCGAACTAGCCCTCATTCAAGCGCGGTGGAAATTTGTGAATGCCGATGAATGTTTGATGACCAGAATGCAAGAGATGTCACTGGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGATTCAACGGGACTGCGGGAGTATGGAGAATTTCGGCGTTGAATGAGGCTGGTGGATGGAAGGATAGGACCACTGTGGAAGATATGGACTTGGCTGTGCGAGCCAGTCTCAAAGGATGGAAATTCTTATACTTGTCCGACTTGAAGGTTAAAAATGAATTGCCAAGCACTCTCAGGGCCTACCGTTACCAACAGCACCGATGGTCTTGTGGTCCAGCCAATCTTTTTAGAAAAATGGTCTTGGAGATCATAAACAACAAGAAAGTGTCATTGTGGAAGAAAATACATGTGATATACAGCTTCTTCTTTGTTCGGAAGGTCGTCGCACACATCAACACCTTTGTGTTCTACTGCATTGTATTACCTGCAACAGTTTTGGTGCCTGAGGTTGTGGTCCCAAAGTGGGGAGCTGTCTACATCCCTTCTGTCATCACAATTCTAAATGCAGTTGGAACTCCAAGGTCACTCCATTTGCTGGTCTTCTGGATTCTCTTTGAGAATGTCATGTCTCTTCATCGAACAAAGGCAACGATTATTGGCCTACTGGAGGCTAGTCGAGTGAACGAATGGGTTGTGACAGAAAAACTTGGTGATGCTTTGAAGGCTAAAGCAGGAGGTAAAGCACCTAAAAAGCCTCGATTCAAGATTGGAGAGAGGATTCACTTGTTAGAACTTGGTGTCGCGTTCTTCCTCTTCTTTTGTGGCTGCTATGATGTTATGTTCGGGAAAAACCACTACTTCATATTCCTCTTTATCCAAGCTCTTGCCTTCTTCATTATGGCATTTGGATATGTCGGCACCATTGTTCCCCAGTCCTAG 1602 0.4519 MDRFSSSTIIPESFIGAKDDLTTQLALVWNQIKAPLIVPLLRLAVFLCLIMSVMMFIERVYMGVVITLVKLFVRKPEKRYKWEPMKDDIELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTVKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDCVAIFDADFQPEPDFLWRTVPFLVHNPELALIQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLKVKNELPSTLRAYRYQQHRWSCGPANLFRKMVLEIINNKKVSLWKKIHVIYSFFFVRKVVAHINTFVFYCIVLPATVLVPEVVVPKWGAVYIPSVITILNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWVVTEKLGDALKAKAGGKAPKKPRFKIGERIHLLELGVAFFLFFCGCYDVMFGKNHYFIFLFIQALAFFIMAFGYVGTIVPQS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02126 533 Pfam Glycosyl transferase family group 2 191 381 IPR001173 -
Phco2g02126 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 313 IPR029044 -
Phco2g02126 533 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 20 528 - -
Phco2g02126 533 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Phco2g02126 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 373 IPR029044 -
Phco2g02126 533 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02126 Phco-Chr2 52026819 52031013 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02126 2 52026819 52031013 Phco9g00985 9 8214938 8220040 ECH
Phco2g02126 2 52026819 52031013 Phco2g02126 2 52026819 52031013 ECH
Phco2g02126 2 52026819 52031013 Phco6g00603 6 5944605 5950813 PCT