Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00591 ATGGGTTTCTACGGAAAAGGAGATTTGGGAGGAGGAACAGCAGCGACAATGGTTCTCAAGACCGAGCTTTGCCGATTCAGTGGTGCAAAGATCTACCCTGGGAAAGGCATACGATTTGTTCGTGGTGATTCTCAGGTCTTCCTCTTCGCCAACTCCAAATGCAAGAGGTATTTCCACAACCGATTGAAGCCGTCAAAGCTCACCTGGACTGCCATGTACAGGAAACAGCATAAGAAGGATATTGCCCAAGAAGCTGTGAAAAAGAGGCGTAGGGCCACCAAGAAACCTTACTCTAGGTCCATTGTTGGTGCTACACTGGAAGTTATTCAGAAGAAAAGAGCAGAGAAGCCAGAAGTTCGTGATGCTGCTAGAGAAGCTGCTCTGCGTGAAATCAAAGAGAGGGTAAAGAAAACAAAAGATGAGAAGAAGGCAAAGAAGGCTGAAGTTCAGGCCAAGTTACAAAAATCACAAGGCAAAGGTGCTGTTAGCAAGGGTGCTGCACCCAAAGGACCCAAGCTTGGTGGTGGGGGTGGCAAGCGCTGA 543 0.4807 MGFYGKGDLGGGTAATMVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERVKKTKDEKKAKKAEVQAKLQKSQGKGAVSKGAAPKGPKLGGGGGKR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00591 180 FunFam 60S ribosomal protein L24 19 80 - -
Phco6g00591 180 Gene3D Ribosomal protein L24e 19 80 IPR038630 -
Phco6g00591 180 MobiDBLite consensus disorder prediction 135 152 - -
Phco6g00591 180 MobiDBLite consensus disorder prediction 135 180 - -
Phco6g00591 180 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 22 74 - -
Phco6g00591 180 PANTHER 60S RIBOSOMAL PROTEIN L24 20 171 IPR000988 -
Phco6g00591 180 Coils Coil 128 159 - -
Phco6g00591 180 Gene3D - 85 154 - -
Phco6g00591 180 CDD Ribosomal_L24e_L24 19 72 IPR000988 -
Phco6g00591 180 SMART 4TRASH 24 62 IPR011017 -
Phco6g00591 180 Pfam Ribosomal protein L24e 20 83 IPR000988 -
Phco6g00591 180 ProSitePatterns Ribosomal protein L24e signature. 26 43 IPR023442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00591 Phco-Chr6 5824585 5827279 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00591 6 5824585 5827279 Phco6g00591 6 5824585 5827279 ECH
Phco2g02116 2 51936472 51938588 Phco6g00591 6 5824585 5827279 PCT