Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02116 ATGCACCGTGGCTTCTTACATTTTGGTTTACAGTACGCGGCCAGACCTCAAGCAGCAGCCATGGTCCTCAAAACTGAACTATGCAGATTCAGTGGTGCCAAGATTTACCCAGGAAAAGGCATCAGATTTGTTCGTGGTGATTCTCAGGTTTTCCTATTTTCCAATTCCAAATGCAAGAGGTATTTCCACAACCGCTTGAAGCCATCAAAGCTTACCTGGACTGCGATGTACAGGAAGCAACACAAGAAGGACATTGCGCAAGAAGCTGTGAAGAAGAGAAGACGCGCTGCCAAGAAGCCTTACTCTAGGTCAATTGTCGGTGCCACTCTGGAAGTTATCCAGAAGAAGAGGACTGAGAAGCCAGAAGTTAGAGACGCAGCCAGGGAAGCTGCCCTTCGTGAAATTAAGGAGAGAATCAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAAGCCGAAGTTGCAGCTAAGTCGCAAAAAGGAGGGAAAGGCAATGTTTCCAAGGGTGCTATGCCTAAAGGTCCTAAACTCGGCGGTGGAGGCGGGAAACGCTGA 552 0.4783 MHRGFLHFGLQYAARPQAAAMVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFSNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRAAKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVAAKSQKGGKGNVSKGAMPKGPKLGGGGGKR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02116 183 Gene3D - 89 158 - -
Phco2g02116 183 FunFam 60S ribosomal protein L24 23 84 - -
Phco2g02116 183 ProSitePatterns Ribosomal protein L24e signature. 30 47 IPR023442 -
Phco2g02116 183 Pfam Ribosomal protein L24e 24 87 IPR000988 -
Phco2g02116 183 Coils Coil 132 159 - -
Phco2g02116 183 SMART 4TRASH 28 66 IPR011017 -
Phco2g02116 183 Gene3D Ribosomal protein L24e 23 84 IPR038630 -
Phco2g02116 183 PANTHER 60S RIBOSOMAL PROTEIN L24 24 175 IPR000988 -
Phco2g02116 183 MobiDBLite consensus disorder prediction 138 156 - -
Phco2g02116 183 CDD Ribosomal_L24e_L24 23 76 IPR000988 -
Phco2g02116 183 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 26 78 - -
Phco2g02116 183 MobiDBLite consensus disorder prediction 138 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02116 Phco-Chr2 51936472 51938588 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02116 2 51936472 51938588 Phco2g02116 2 51936472 51938588 ECH
Phco2g02116 2 51936472 51938588 Phco6g00591 6 5824585 5827279 PCT