Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00587 ATGAAAATACTTGGGCTATCAGAAATGAGTAGTGGAAAATGGAATTGTGCAGGGTGGATTACAGAAGAATTTTTAATTTTGAAGGTAATCATGATGATGGTGCCTTTCTTCATGCTTACAGTACTTGCTGCTGGGAAACATCCACATGTTTGCAGATGGGGTTTTGTTGTAAAGTGTGACTATAGATATAATTCCACCTTCGATCAATATAATGGAACAGAAGTTTTCAATCTCTCTAAACCTTCGTTCAATCTACGGCCATACGTGGATGAAACTAAAGTTTTGAATGCCTCCAAACCTTGGTTCATTTTACCTTATGTGAATGAATCTAGTGAACCTCACCTACTACAGGAGCAAAATGGAAAGTCAAGCATCTTAGATAAAATGGAAATTGGTTTGGCAGAAGCTCGAGCTGCAATCAGAGAAGCCAGAAATGGGAATCGAACACCAGATTCAGATTACGTTCCCAAAGGTCCAATGTATTGGAATGCTAAGGCATTTCACAGGAGTTACTTAGAAATGGAGAAACAGTTTAAAGTATTTTCCTATGGAGAAGGGGAGCCTCCAATTTTCCACAATGCACCTTGCAAAAGCAAATACTCCATGGAGGGTAACTTCATGCATGCTATTGAAATGAATAATCATTTTCGAACTAAAGATCCCGAGAAAGCACATGTATTTTTCCTCCCTAGGGTTGGATATGGGTATGAAAGAGTCTCACAAAACTTAAGTCCCGTGAAGAAAACTGCCACAGATTATGTCAGTGTCATTGCAGCAAGATATCCTTATTGGAATCGAAGTCTTGGAGCAGATCACTTCACCCTTGCTTGCCATGACATGTGTGGAGGGACATCTCTATCCTTACCTAGTCCACACAAGAACTCTATTCGTGTACTTTGTAATGCCAACACATCTGAAGGATTTAAGCCTATAAAGGATGTCTCATTTCCTGAAATCAATCTCAAAACCAGTTCAATAAAAAGGTTCAGTGGTGGACAATCTGCATTTAAACGTTCAATTCTGGCTTTCTTTGCAGGGGGAGTTCATGGCCCCATTAGACCAGTTCTTCTTAAGCATTGGGAAAACAAGGATGAAGATATTCAGGTTCACAAGTATCTCCCAAAGGGGACTTCTTACCATGAGATGATGAGGAAGAGCAAGTTTTGCCTTTGTCCTAGTGGGTATGAGGTGGCTAGCCCTAAAGTGGTGGAGGCAATTTACACTGGGTGTGTTCCTGTGCTCATTTCTGAGCACTATGTCCCTCCTTTCAACGATGTTTTGAATTGGAAGTCATTTTCAGTTGAGGTTTCAGTGAAGGAAATTCCTAACTTGAAGGAGATTTTGATGAGTATTCCTCCAAAACAATATATAAGAATGCAGAAAAGAGTAGAACAAATTGGAAGACACTTTGAAGTACACTCTCCACCCAAGCGATTCGATGTGTTTCACATGATCCTTCACTCTGTGTGGCTTAGGAGACTCAACTTGGAAATTCACCATGATCAAAGAATCGTAAGTCAGTGA 1524 0.4016 MKILGLSEMSSGKWNCAGWITEEFLILKVIMMMVPFFMLTVLAAGKHPHVCRWGFVVKCDYRYNSTFDQYNGTEVFNLSKPSFNLRPYVDETKVLNASKPWFILPYVNESSEPHLLQEQNGKSSILDKMEIGLAEARAAIREARNGNRTPDSDYVPKGPMYWNAKAFHRSYLEMEKQFKVFSYGEGEPPIFHNAPCKSKYSMEGNFMHAIEMNNHFRTKDPEKAHVFFLPRVGYGYERVSQNLSPVKKTATDYVSVIAARYPYWNRSLGADHFTLACHDMCGGTSLSLPSPHKNSIRVLCNANTSEGFKPIKDVSFPEINLKTSSIKRFSGGQSAFKRSILAFFAGGVHGPIRPVLLKHWENKDEDIQVHKYLPKGTSYHEMMRKSKFCLCPSGYEVASPKVVEAIYTGCVPVLISEHYVPPFNDVLNWKSFSVEVSVKEIPNLKEILMSIPPKQYIRMQKRVEQIGRHFEVHSPPKRFDVFHMILHSVWLRRLNLEIHHDQRIVSQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00587 507 Gene3D Glycogen Phosphorylase B; 333 474 - -
Phco6g00587 507 Pfam Exostosin family 175 451 IPR040911 -
Phco6g00587 507 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 92 489 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00587 Phco-Chr6 5788888 5793464 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00587 6 5788888 5793464 Phco6g00587 6 5788888 5793464 ECH
Phco2g02114 2 51927346 51930665 Phco6g00587 6 5788888 5793464 PCT