Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02114 ATGGGTACTGGTACATGGGGTCCAGGGGCATCTTCATCCACGAAGCTCTTTCTGTTCATGATGCCTCTGGTGCTTGTTGCAGGGCTTGTTTCTGTTTTCGGTCCTAACCCCTCTAGTTGGCTTTTCACTGCAAAGCCACCTGCGTTATTATTCAGCTCTGTTACTTCCTCAACTGGTAGTACTGGTGCTCTGACCACCCCTTCTGAGGTGAACCAGAAAGAAGGGTTGGTGGTGGTTGCCGTGGATAATCGCGCAGGAGAGAATGTTATCTCTGATGACACTCACTTCAATCTCTCCTCTACTCCTCCATTTTCTGTTCAGGCCATACAAACACCTCAACAACATAGCAGGGATGAAGAAACCGTTCCCGAAAATTTGGGCAACGTGACTTCCGTGAATGAGTCTTATGAAGCAGCAGAGAGGCCAAAACTGCAGAGAAAATTCAGCATCTTAGATAGAACTGAAGCAGGTCTAATAAAAGCTCGAGCTGCAATTAGAGAAGCAAGAAACGGAAATCAAACGCAAGATGCAGACTACGTTCCTATTGGACCAATGTACATGAATGCCAATGCATTTCACAGGAGTTACTTGGAAATGGAGAAACAGTTGAAAGTGTATGTGTACGAGGAAGGGGAGGCTCCAGTTTTTCATAACGGACCTTGCAAGAGCATATACTCGATGGAGGGGAATTTCATCCATGGCATTGAGATGAATGAGAAATTCAGAACAAGAGATCCTGAGAAAGCACATGTGTTTTTCTTACCCTTTAGTGTGGCAATGTTGGTCCAATTTGTGTATGTACGTGATTCTCATGACTTTGGCCCCATAAAAAAAACTGTCACGGATTACGTCAACGTCATCGCAGGAAGATACCCCTATTGGAACAGAAGCCTTGGAGCTGATCATTTCTATATTGCTTGCCACGATTGGGGGCCAGAGACTTCGCGTTCTGTTCCTAATTTGCAAGATAATTCGATACGTGTGTTGTGCAACGCCAACACTTCTGAGGGATTCAAGCCTTCCAAGGATGTCTCTTTGCCGGAAATCAATCTCCAAAGTGGTTCCATAAACGGTTTGATTGGTGGGCCGTCTGCTTCTAAACGTCCACTCTTGGCCTTCTTTGCTGGTGGGCTTCACGGCCCAATTAGGCCCATTCTTCTTGAACACTGGGAAAACAAGCAGGAGGACATGCAGGTTCACAAGTACCTCCCCAAGGATGTCTCCTACTATGAGATGCTGAGGAAGAGCAGGTTCTGCCTTTGTCCTAGTGGGTACGAGGTAGCAAGTCCCAGAGTAGTGGAAGCAATCTACACAGGGTGTGTTCCAGTTCTCATTTCAGATCACTATGTCCCTCCGTTCAGTGATGTTTTGAATTGGAAGTCCTTTTCCGTTGAGGTTTCGGTTGAAGACATTCCCAAATTGAAGGATATTTTGTTGAGTATTTCTCCAACACAGTATATAAGAATGCAGAGGAGAGTGGTACAAGTTAGGAGGCACTTTGAGGTGCACTCTCCTCCCAAGAGATTCGATGTATTTCACATGATCCTTCATTCTGTATGGCTTAGAAGATTGAACTTTAGAGTCCACCACCATCATCAGTCACAACTCTCTTAA 1614 0.4542 MGTGTWGPGASSSTKLFLFMMPLVLVAGLVSVFGPNPSSWLFTAKPPALLFSSVTSSTGSTGALTTPSEVNQKEGLVVVAVDNRAGENVISDDTHFNLSSTPPFSVQAIQTPQQHSRDEETVPENLGNVTSVNESYEAAERPKLQRKFSILDRTEAGLIKARAAIREARNGNQTQDADYVPIGPMYMNANAFHRSYLEMEKQLKVYVYEEGEAPVFHNGPCKSIYSMEGNFIHGIEMNEKFRTRDPEKAHVFFLPFSVAMLVQFVYVRDSHDFGPIKKTVTDYVNVIAGRYPYWNRSLGADHFYIACHDWGPETSRSVPNLQDNSIRVLCNANTSEGFKPSKDVSLPEINLQSGSINGLIGGPSASKRPLLAFFAGGLHGPIRPILLEHWENKQEDMQVHKYLPKDVSYYEMLRKSRFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVEDIPKLKDILLSISPTQYIRMQRRVVQVRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRVHHHHQSQLS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02114 537 Pfam Exostosin family 200 479 IPR040911 -
Phco2g02114 537 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 50 519 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02114 Phco-Chr2 51927346 51930665 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02114 2 51927346 51930665 Phco2g02114 2 51927346 51930665 ECH
Phco2g02114 2 51927346 51930665 Phco6g00587 6 5788888 5793464 PCT