Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00578 ATGTCCACTAGATTTCGGGGATCAGAAGAACACCAACATGGTTCTTCTTCCACCACCCACAGAACCAAAACTTCACACCATCCCCCTGCCCAAGCTGCTGAACTTGTTGCTACTTTGAAGGATAAAAGTGTTGATGAGTTGCGGGAGCTTTTATCTAACAAAGACGCATATCAGCAGTTTTTACATTCACTTGAGGAGGTCAAGATTCAAAATAATGTGAATGATGAACTTTGCAAGGAGAATCTGCAGCTTGCTGACGAAAATCTACGAAAAGAACCTCGCATTGTGGAACTCAGGAACCAGCATAGAATAATTTGTACGACTGAGTTAGCTGCTGCTCAAGAGAAACTAAATGAGCTTTACAGGCAGAAAGAGAAAGTGACAAAGTTGGATTCCCCACTTTATCTTCTCCAAAGGATTCAAGAGGCTATGAATAAGACAGATGAGGAATCTGAAAATCTGCACCATCAAGTCCTTGACAGAGAGATTGACCTTGGAGCATTTATGCAGAAATACAAAAAGCTACGTACCGCTTACCACAGGAAAAGTCTAATAAATCTTGCAGCTAAGACATCAAACATACGAGCATCGCATACGGAAATCAAGAATTAG 612 0.4118 MSTRFRGSEEHQHGSSSTTHRTKTSHHPPAQAAELVATLKDKSVDELRELLSNKDAYQQFLHSLEEVKIQNNVNDELCKENLQLADENLRKEPRIVELRNQHRIICTTELAAAQEKLNELYRQKEKVTKLDSPLYLLQRIQEAMNKTDEESENLHHQVLDREIDLGAFMQKYKKLRTAYHRKSLINLAAKTSNIRASHTEIKN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00578 203 Coils Coil 137 157 - -
Phco6g00578 203 MobiDBLite consensus disorder prediction 1 17 - -
Phco6g00578 203 ProSiteProfiles VPS37 C-terminal domain profile. 114 197 IPR009851 -
Phco6g00578 203 SUPERFAMILY Endosomal sorting complex assembly domain 135 182 IPR037202 -
Phco6g00578 203 Pfam Modifier of rudimentary (Mod(r)) protein 40 184 IPR009851 -
Phco6g00578 203 MobiDBLite consensus disorder prediction 1 29 - -
Phco6g00578 203 Coils Coil 110 130 - -
Phco6g00578 203 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 14 192 - -
Phco6g00578 203 Gene3D Helix hairpin bin 123 187 IPR029012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00578 Phco-Chr6 5712273 5714967 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00578 6 5712273 5714967 Phco6g00578 6 5712273 5714967 ECH
Phco2g02104 2 51829064 51833390 Phco6g00578 6 5712273 5714967 PCT