Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02104 ATGCGCAGGGGATCACAAGACCAACAGTCACAGGATGGTTCTTCGCAGTCACAGTCGTGGTATCCACCATCAGTGGTAAGTTCACCAAGTTCGTCAAGGCCTGTTACACCATCTGGTTCTTCTTCTTCATTATCGCATAGGCCTTCTTCTCATGTTCCGCCCTCGGAAGCTGCTGGAGTTATTGCCGTTTTGAAGGACAAGAGCGTTGATGAGTTGCGGAAGCTTTTATCTGACAAAGATGCATATCAGCAGTTTCTACATTCGCTTGATCAGGTCAAGATTCAAACTAATCTGAAAGATGAACTTTGCAAGGAGAATTTACAGCTTGCAGAAGAAAATCTTCAAAAGGAACCTCGTATCATGGAACTTAGGAATCAATGTAGAATAATTCGGACAACTGAGTTAGCTGCTGCAAAGGAGAAACTAAATGAGCTTGAGAAGCAGAAAGAAGAAATGTTGAAACTGAATTCGCCAGCATCCCTTATCCAGAGGATTCAAGAGTCTGTGAATAAGATTGAAGAGGAATCTGACAATCTACACCAGCATTTCCTTGACAGAGAGATTGATCTTGTGGCTTTCTTGCAAAAGTACAAGAAGCTACGTACAACTAACCACAAAAAGACTCTCATACATCTTGCTGCTAAAACATCAACTTTGACATTGGTCAAAGATACGTGCCACCTATTACAAAGTTGTGGTCATTGGGATTCAGCAATCTACTATTAA 726 0.416 MRRGSQDQQSQDGSSQSQSWYPPSVVSSPSSSRPVTPSGSSSSLSHRPSSHVPPSEAAGVIAVLKDKSVDELRKLLSDKDAYQQFLHSLDQVKIQTNLKDELCKENLQLAEENLQKEPRIMELRNQCRIIRTTELAAAKEKLNELEKQKEEMLKLNSPASLIQRIQESVNKIEEESDNLHQHFLDREIDLVAFLQKYKKLRTTNHKKTLIHLAAKTSTLTLVKDTCHLLQSCGHWDSAIYY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02104 241 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 13 217 - -
Phco2g02104 241 Coils Coil 162 182 - -
Phco2g02104 241 SUPERFAMILY Endosomal sorting complex assembly domain 157 206 IPR037202 -
Phco2g02104 241 MobiDBLite consensus disorder prediction 1 54 - -
Phco2g02104 241 Pfam Modifier of rudimentary (Mod(r)) protein 65 208 IPR009851 -
Phco2g02104 241 Coils Coil 128 155 - -
Phco2g02104 241 MobiDBLite consensus disorder prediction 7 50 - -
Phco2g02104 241 ProSiteProfiles VPS37 C-terminal domain profile. 139 235 IPR009851 -
Phco2g02104 241 Gene3D Helix hairpin bin 143 213 IPR029012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02104 Phco-Chr2 51829064 51833390 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02104 2 51829064 51833390 Phco2g02104 2 51829064 51833390 ECH
Phco2g02104 2 51829064 51833390 Phco6g00578 6 5712273 5714967 PCT