Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00552 ATGGCGGAAGAACACCGATGCGAGACTCCGGAAGGTCACCGTCTCTGCGTCAACAACTGCGGCTTCTTCGGTAGCTCCGCTACCATGAACCTCTGCTCCAAATGCTACGGCGCGATCCGTTTGAAGGAGCAGGACGACGCGTCAACCAAATCCACGATCGAAGCCGCGCTCTCTTCCTCCTCTAAGACGCCGCTGTCCACGTCGCCTCCAGCGGCGGTCGATGTCCTTGTCGTAGCATCGCCTCCGCTTCCGGCAGAAGTTACGGTCGCGGTTCCGGTTCAGGTCCCGGTGACGTCGAGTTCTATTACAGGGTCGGCGCAACCGAACCGGTGCGCCGCGTGTCGGAAGCGCGTGGGGTTAACTGGGTTCAAGTGCAGGTGCGGAGTCACGTTCTGTGGGGCTCACAGGTATCCGGAGAAGCACGCGTGCGGGTTCGACTTTAAGACGGTGGGGCGAGAGGAGATTGCTCGGGCTAACCCCGTGATCAAAGCAGAGAAGCTGCGGAGGATATGA 513 0.6043 MAEEHRCETPEGHRLCVNNCGFFGSSATMNLCSKCYGAIRLKEQDDASTKSTIEAALSSSSKTPLSTSPPAAVDVLVVASPPLPAEVTVAVPVQVPVTSSSITGSAQPNRCAACRKRVGLTGFKCRCGVTFCGAHRYPEKHACGFDFKTVGREEIARANPVIKAEKLRRI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00552 170 FunFam Zinc finger AN1-type containing 6 88 166 - -
Phco6g00552 170 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 61 - -
Phco6g00552 170 ProSiteProfiles Zinc finger AN1-type profile. 105 151 IPR000058 GO:0008270
Phco6g00552 170 Gene3D - 1 65 - -
Phco6g00552 170 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 170 - -
Phco6g00552 170 Pfam AN1-like Zinc finger 111 147 IPR000058 GO:0008270
Phco6g00552 170 Gene3D - 90 166 IPR035896 -
Phco6g00552 170 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Phco6g00552 170 SMART AN1_Zf_4 111 148 IPR000058 GO:0008270
Phco6g00552 170 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Phco6g00552 170 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Phco6g00552 170 SUPERFAMILY AN1-like Zinc finger 104 165 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00552 Phco-Chr6 5380432 5380944 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02172 2 52454061 52455282 Phco6g00552 6 5380432 5380944 PCT