Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02172 ATGTGCCGGTTGCCTTCTTCTCCACCACAACACTGCCGTCAAAGCCAGGCTGTCTGTTTTTCATTCTCACATTCTTTCATCCTTCCTCTTTTCTCTACCCACTTTCGTTCTTATCTTCTTCTTCTTATTCTTCTTCTGCTTCTTCTTCTTCCCCAACCCACAATCACTCCTTATAAATCAGATTTTTTTCTCACAGATCCAGACATGGCGGAAGAACACCGATGCCAAGCTCCCGAGGGTCACAGACTCTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCCGCCACCATGAATCTCTGTTCCAAATGCTACAGAGACATCCGACTGAAGGAAGAAGAACAAGCCAAAACCAAATCCACCATCGAAACCGCTCTGTCTTCATCCTCCGCCGCAGCAGCAGGAACAGCAACCGTCGCCTCCGCCGCGGCTGTGGTTTCCTTGCCTTCGCCGGTTGAATCCCTCCCTCAACCGGCGGTGGTGACCGCGCCGGACGCGTGCGCACCGTTTCAGGCGAACCGGTGCGGCGCGTGTCGGAAGCGCGTGGGGTTGACCGGGTTCAAGTGCAGGTGTGGAACGACGTTCTGTGGGAGCCACAGGTACCCCGAGAAACACGCGTGTGGGTTCGATTTCAAGGCGGTGGGGAGAGAGGAGATAGCTCGGGCGAATCCGGTGATCAAAGGCGAGAAGCTACGGAGGATTTAA 702 0.5484 MCRLPSSPPQHCRQSQAVCFSFSHSFILPLFSTHFRSYLLLLILLLLLLLPQPTITPYKSDFFLTDPDMAEEHRCQAPEGHRLCANNCGFFGSPATMNLCSKCYRDIRLKEEEQAKTKSTIETALSSSSAAAAGTATVASAAAVVSLPSPVESLPQPAVVTAPDACAPFQANRCGACRKRVGLTGFKCRCGTTFCGSHRYPEKHACGFDFKAVGREEIARANPVIKGEKLRRI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02172 233 ProSiteProfiles Zinc finger A20-type profile. 78 112 IPR002653 GO:0003677|GO:0008270
Phco2g02172 233 Gene3D - 67 131 - -
Phco2g02172 233 PANTHER AN1-TYPE ZINC FINGER PROTEIN 80 233 - -
Phco2g02172 233 SMART A20_3 81 105 IPR002653 GO:0003677|GO:0008270
Phco2g02172 233 Gene3D - 149 229 IPR035896 -
Phco2g02172 233 FunFam Zinc finger AN1-type containing 6 151 229 - -
Phco2g02172 233 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 83 127 - -
Phco2g02172 233 ProSiteProfiles Zinc finger AN1-type profile. 168 214 IPR000058 GO:0008270
Phco2g02172 233 Pfam A20-like zinc finger 82 105 IPR002653 GO:0003677|GO:0008270
Phco2g02172 233 SUPERFAMILY AN1-like Zinc finger 169 228 IPR035896 -
Phco2g02172 233 SMART AN1_Zf_4 174 211 IPR000058 GO:0008270
Phco2g02172 233 Pfam AN1-like Zinc finger 174 210 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02172 Phco-Chr2 52454061 52455282 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02172 2 52454061 52455282 Phco2g02172 2 52454061 52455282 ECH
Phco2g02172 2 52454061 52455282 Phco6g00552 6 5380432 5380944 PCT