Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00494 ATGGCTGTGCCTGGTGGTGACTTGCTGAGTGAGAAAGCTTCGGCGATGAGAGCGTCTCTGGAGAGAAGTCAGACCATCACCGACGACGTCGTTTCGATTCTGGGCTCCTTCGACCACCGCCTTTCCGCCCTGGAAACCGCCATGCGACCTACCCAGATCAGAACACATTCTATTCGGAAAGCTCACGAGAACATTGATAGGACTTTGAAGACTGCAGAAGCCATATTGGCTCACTTTGATCAATATTATCAGGCAGAAGCAAAAATAATTAAAGGACCACATGAAGATGTGAAGAGCTATCTTGAAGCAATTGATCAGCTGAGACGAAACATTAGATTTTTTGGCAATAAAAAGGGTTTTAAGAACGATGATGGTATTGCCATCCGTGCCAATAATTTGATAGGCGAAGCTATTTCTAAGCTAGAAGAAGAGTTTAAGCGGCTATTATCATCTTACAGCAAACCTGTGGAACCTGAACGCCTCTTTGGTTCTCTTCCAAACACAATGCGACCTTCATCAGCATCACCAGGTCATGATGATGATTCCAGCAGCAAGAATAATTCACATATCCATTCTGAGCCACATAAAAGTAATGCTGATACTGTTGTATACACACCTCCTGTTCTTATACCACCAAGAATATTGCCGTTGCTCAATAATTTAACTGAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTGCTCAAAATATACAGAGATACCCGTTCTAAAGTATTGGAAGAAAGCCTACAAAAGCTTGGAGTAGAGAAACTCAACAAAGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTCAAATTGTTGTTTTCTGCCGAACGGAAAGTCTGTGATCAGATATTTGAAGGATTTGACTCGCTTAGTGATCAGTGTTTTGCTGAAGTAACTACAAACAGTATTTCCATGCTGCTTAGTTTTGGAGAAGCTATTGCCAAAAGCAAGAGATCACCTGAAAAGTTATTTGTGCTTTTGGATATGTATGAAATATTGCAAGAAATCCATTCAGAGATTGAAATACTCTTTAAAGGCAGAGCTTGCACCAAAATAAGAGAAGCTGTAATGGGTTTGACAAAACAGCTTGCACAAACGGCCGAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAAAAAGATGCTACAAAGACTGCAGTAACTGATGGAACTGTTCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGGTCTACCTTAAACCAACTTTTCCAAGGAGTTGAAGGTGAAAGTGATTCTTCACAGCTAGCTTCTGTGACCATGCGAATATTGCAAGCTCTTCAAACCAATTTAGATGGGAAATCTAAGCAATATAGAGACCCTGCTTTGACACACCTATTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTCGAAGGTCCGAAGCGAAGGATTTGATGGGGGATGATTGGATACAACGACATAGGAAAATTGTGCAACAGCATGCCAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGGCCCTCTCTATTCAGGGCCTCATCTCATCAAGTGGTGGGGGTAGTACTGCTGGTGGTGATGGGGGCAGTAGTGGTGCTTCAAGAGCAGTTGTTAAAGACAGGTTTAAGACATTCAATACTATGTTTGAGGAACTTCATCAGAAACAATCTCAGTGGACAGTACCAGACTCAGAGTTGCGAGAATCTCTCATTCTTGCAGTTGCTGAAGTCTTGTTACCTGCCTATAGATCATTTGTGAAACGTTTTGGGCCTCTAGTGGAGAATGTAAAGAGTAGTCAGAGGTACATCAAATACACTGTGGAAGATCTAGAGCGAATCCTAGGTGAATTTTTTGAAGGAAAAAACATGAATGATTCCAAGCGGTAA 1947 0.4104 MAVPGGDLLSEKASAMRASLERSQTITDDVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKTAEAILAHFDQYYQAEAKIIKGPHEDVKSYLEAIDQLRRNIRFFGNKKGFKNDDGIAIRANNLIGEAISKLEEEFKRLLSSYSKPVEPERLFGSLPNTMRPSSASPGHDDDSSSKNNSHIHSEPHKSNADTVVYTPPVLIPPRILPLLNNLTEQMVQAGHQQQLLKIYRDTRSKVLEESLQKLGVEKLNKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFSAERKVCDQIFEGFDSLSDQCFAEVTTNSISMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHSEIEILFKGRACTKIREAVMGLTKQLAQTAEETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLNQLFQGVEGESDSSQLASVTMRILQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLMGDDWIQRHRKIVQQHANQYKRNAWAKILQALSIQGLISSSGGGSTAGGDGGSSGASRAVVKDRFKTFNTMFEELHQKQSQWTVPDSELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSSQRYIKYTVEDLERILGEFFEGKNMNDSKR 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00494 648 MobiDBLite consensus disorder prediction 182 196 - -
Phco6g00494 648 SUPERFAMILY Cullin repeat-like 75 639 IPR016159 -
Phco6g00494 648 MobiDBLite consensus disorder prediction 166 181 - -
Phco6g00494 648 Gene3D Exocyst complex component Exo70 73 648 - -
Phco6g00494 648 Pfam Exo70 exocyst complex subunit 277 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
Phco6g00494 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 56 640 IPR004140 GO:0000145|GO:0006887
Phco6g00494 648 MobiDBLite consensus disorder prediction 160 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00494 Phco-Chr6 4743986 4754102 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00494 6 4743986 4754102 Phco6g00494 6 4743986 4754102 ECH
Phco2g01968 2 50401684 50403591 Phco6g00494 6 4743986 4754102 PCT