Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01968 ATGAGAAAGTTGTGTTTTAACCCCAAGACGCCGTCGTTTGCCTTGGCCCGCAATTCTCCTTCTTCGCCACAATCTTTAGTCTCATGCCCAACACCGCCCAGGCTCAGCTTTTCTGAACCTACCAGCTTCGACGAAGATAGCTTCATGGAGGAAGCAGAGGCACTCATACTGAAATGGAACCCTGACTCCTCAGCCTACGCCAAAGTCACTTCCCTATTTTACCAAGACAAAACCGAAGCCAAACATTACATTAACTGCGTTAACCAGCTTCACCAAACCATGCATTCCTTGCTCTCTTACAGCCCTTCCTCCCATAAACTTATCCTCGCTCACAACCTAATGCAGATCGCCATGAAGAGACTCAGGAAAGAGTTCTACCAGATCTTATCCATGAACCGCGCTCACCTTGACCCCGAATCAGTCTCCGCCAGATCCTCTCGCACCTCCGCCAATTCCAGCTCATCCGATTACGACGACGACTTCGCGGCGGAAGACGACGATATCCGCGCCGCCGGCGACTCCATCTCCGAAGTTGAGCAGGTTTCCTCAGGCGCCATGGCGGATCTGAAATTAATCGCCGACTGCATGGTCTCTTCCGGCTACGCGAAAGAGTGCGTCAGCGTTTACATCATCATCCGAAAATCCATAATCGACGAAGGAATCTATCGCCTCGGCGTTGAGAAACTGAGCTCCTCGCGCGCTAACAAGATGGATTGGGATGTGCTTGATTTGAAAATCAAGAATTGGTTAGAGGCAGTAAGGATTTCCGTTAGAACGCTCTTTAACGGAGAGAGAATCCTCTGCGACGATGTCTTCAGTTACTCAGATTCCGTCAGAGAATCCTGCTTCGCCGAGATTTCCAGAGACGGCGCTTCTCTCCTTTTCGGATTCCCCGAACTCGTCGCCAAAACCAAGAAATTGTCGCCGGAGAAGCTGTTCCGCATGCTCGACATGCACGCTGTGGCTTCAGAACTGTGGCCGGAGATCGAGTCCATCTTCTCCTCCGATTACAACTCCGCCGCGCGTTCTCAGTTCCTCACTTCACTTCAACGACTCACCGAGTCTGCGCAATTCTTGCTCGCAGAGTTCGAGTCCACGATCCAAAAAGACTACTCCAAGTCCGCGGTTAACAGAGGCGGCGTGCACTCGCTCACGATTCAGACGATGAATTATTTGGCAATCCTCGCAGATTACGTCAACGTACTCTCTGACATATTCCCGCGCGACTGGCTTCCGCTACCGAAGTCTGCGCCGCTGCCGGAGTCTTATTTATACAGTCCGGAGTCTGATTACTCTGCGTCGACGCCGGCGCTGACGGTCCGCATGGCGTGGCTGATTCTTGTACTCCTTTGCAAGCTCGACGGCAAAGCGAAGCATTGCAAGGACGTTTCACTCTCTTATTTGTTTCTGGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATTACGAAGCACGAAGCTAAAGCGAAGAGGTTCGTCGCGAACTACGAGAAGGTGGCTTGGGGAGAAGTGGTTTCATCGCTGCCGGTAAATCCGGCCGTAGCGGAGGCGAGGGCGGTGTTTGAGAACTTCAACCTCAAATTTGAGGAAGCATATCGGAAGCAGAACTCGTTTGTGGTAGCTGATAGAGAACTGCGAGACGAAATAAAAGGTTCGATCGCGAGAAGTATTGTGCCCAAATATCGCGAGTGGTATAATGCGCTGCTTGCTACGGTGGGATCAGTGAGGGACTTGACGGTAAGGGAGTATGTCACGTTTACCCCTGAAGACATTGAAAATTACCTCGCTAACCTCTTCTTTTTTGGAACGTCATCCAGTTCTGTATCGTCCTCGTCGGTAACTTCCTCCCCTCTCCGGAGTTGGAGTTAA 1908 0.5157 MRKLCFNPKTPSFALARNSPSSPQSLVSCPTPPRLSFSEPTSFDEDSFMEEAEALILKWNPDSSAYAKVTSLFYQDKTEAKHYINCVNQLHQTMHSLLSYSPSSHKLILAHNLMQIAMKRLRKEFYQILSMNRAHLDPESVSARSSRTSANSSSSDYDDDFAAEDDDIRAAGDSISEVEQVSSGAMADLKLIADCMVSSGYAKECVSVYIIIRKSIIDEGIYRLGVEKLSSSRANKMDWDVLDLKIKNWLEAVRISVRTLFNGERILCDDVFSYSDSVRESCFAEISRDGASLLFGFPELVAKTKKLSPEKLFRMLDMHAVASELWPEIESIFSSDYNSAARSQFLTSLQRLTESAQFLLAEFESTIQKDYSKSAVNRGGVHSLTIQTMNYLAILADYVNVLSDIFPRDWLPLPKSAPLPESYLYSPESDYSASTPALTVRMAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWITKHEAKAKRFVANYEKVAWGEVVSSLPVNPAVAEARAVFENFNLKFEEAYRKQNSFVVADRELRDEIKGSIARSIVPKYREWYNALLATVGSVRDLTVREYVTFTPEDIENYLANLFFFGTSSSSVSSSSVTSSPLRSWS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01968 635 SUPERFAMILY Cullin repeat-like 50 612 IPR016159 -
Phco2g01968 635 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Phco2g01968 635 MobiDBLite consensus disorder prediction 140 161 - -
Phco2g01968 635 Pfam Exo70 exocyst complex subunit 247 609 IPR046364 GO:0000145|GO:0005546|GO:0006887
Phco2g01968 635 MobiDBLite consensus disorder prediction 140 157 - -
Phco2g01968 635 Gene3D Exocyst complex component Exo70 65 620 - -
Phco2g01968 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 49 612 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01968 Phco-Chr2 50401684 50403591 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01968 2 50401684 50403591 Phco6g00494 6 4743986 4754102 PCT
Phco6g00799 6 7913655 7915553 Phco2g01968 2 50401684 50403591 PCT