Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00384 ATGCACTCCACTCCGTTGCTCCTTGAGGAGCCTATCAGAATGGCTTCCATCCTCGAACCATCCAAGCCTAGTTTCTTTCCAGCTATGACAAAGATTGTTGGCACACTTGGCCCTAAGTCACGATCAGTTGATGTGATTTCTCAATGTCTTGAGGCAGGAATGTCTGTGGCAAGGTTTGATTTTTCATGGGGTGATCCAGAATACCACCAAGAGACATTGGAAAATCTAAGGACTGCTATCAAAAGTACCAAGAAACTCTGTGCGGTTATGCTAGATACTGTGGGTCCAGAACTACAAGTTGTCAACAAAACGGAGCACCCAGTTTCCCTTCAGGCTGACACATTGGTTGTCTTAACTCCTGATCAGAACAAAGAAGCTGCTTCAAATCTTTTGCCTTTAAATTTTAATGGGCTTTCAAAGGCTGTGAAGAAGGGTGATACTATTTTTATAGGTCAATACCTGTTTACTGGAAGTGAAACAACCTCAGTGTGGCTTGAGGTCAGCGAAGTGAATGGTGATGATGTCACTTGTGTCATAAAAAATTCTGCTACTCTTTCTGGGTCGCTGTATACTTTACATGTCTCACAAATTCATATTGATCTTCCCACTCTAACCAATAAGGATAAGGAGGTAATAAGCACTTGGGGTGTTCAAAACAATATAGACTTCCTCTCATTATCATTCACCAGGCACGCTGAAGATGTTCGCCATGCCCGTGAGTTTCTCTCTAAATTAGGTGACCTCAAACAAACACAGATCTTTGCAAAGATTGAAAATATAGAGGGATTGACTCATTTTGATGAGATATTGCGAGAAGCGGATGGTATCATCCTCTCACGTGGAAATTTGGGGATAGATCTTCCACCTGAGAAGGTGTTTTTATTCCAAAAGGCGGCTATTTACAAGTGTAACATGGCTGGAAAACCTGCTGTTGTCACACGTGTTGTGGACACTATGACTGACAACCTAAGGCCTACTCGTGCTGAAGCAACTGATGTTGCCAATGCAGTCTTAGATGGAAGTGATGCGATTGTTCTAGGGGCAGAGACTTTGCGTGGATTATACCCTGTGGAGACTATTTCCACTGTTGGAAAAATTTGTGCCGAGGCAGAGAAAGTTTATAATCAAGATATATATTTCAAGAAGGCTGTCAAATTTGTGGGTGAGCCAATGACTCATTTGGAATCAATAACTTCCTCTGCGGTTCGGGCAGCCATCAAGGTTAAGGCTTCCGTTATTATTTGCTTTACTTCATCCGGAAGGGCTGCAAGGCTGATTGCCAAGTACCATCCAACCATGCCCGTGATATCTGTTGTCATTCCTCAACTAAAGACAAATCAACTTCGATGGACTTTCACTGGAGCTTTTGAGGCTAGACAATCACTTATTGTGAGAGGTCTTTTCCCTATGCTGGCTGATCCACGACACCCAGCTGAGAGTAAAAGTGGAACGAGTGAATCAATTTTGAAGGTTGCTTTAGACCATGGCAAGGCTTTTGGTATCATAAAGCCACATGATCGAGTTGTTGTTTGCCAGAAAGTTGGTGACTCCTCAGTTGTGAAGATTATTGAGCTTGACGAGTAG 1584 0.4287 MHSTPLLLEEPIRMASILEPSKPSFFPAMTKIVGTLGPKSRSVDVISQCLEAGMSVARFDFSWGDPEYHQETLENLRTAIKSTKKLCAVMLDTVGPELQVVNKTEHPVSLQADTLVVLTPDQNKEAASNLLPLNFNGLSKAVKKGDTIFIGQYLFTGSETTSVWLEVSEVNGDDVTCVIKNSATLSGSLYTLHVSQIHIDLPTLTNKDKEVISTWGVQNNIDFLSLSFTRHAEDVRHAREFLSKLGDLKQTQIFAKIENIEGLTHFDEILREADGIILSRGNLGIDLPPEKVFLFQKAAIYKCNMAGKPAVVTRVVDTMTDNLRPTRAEATDVANAVLDGSDAIVLGAETLRGLYPVETISTVGKICAEAEKVYNQDIYFKKAVKFVGEPMTHLESITSSAVRAAIKVKASVIICFTSSGRAARLIAKYHPTMPVISVVIPQLKTNQLRWTFTGAFEARQSLIVRGLFPMLADPRHPAESKSGTSESILKVALDHGKAFGIIKPHDRVVVCQKVGDSSVVKIIELDE 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00384 527 Pfam Pyruvate kinase, barrel domain 30 374 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g00384 527 SUPERFAMILY PK C-terminal domain-like 358 522 IPR036918 -
Phco6g00384 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 9 376 IPR015813 GO:0003824
Phco6g00384 527 Gene3D - 363 525 IPR036918 -
Phco6g00384 527 Pfam Pyruvate kinase, alpha/beta domain 395 519 IPR015795 -
Phco6g00384 527 PANTHER PYRUVATE KINASE 28 512 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g00384 527 FunFam Pyruvate kinase 371 513 - -
Phco6g00384 527 FunFam Pyruvate kinase 96 202 - -
Phco6g00384 527 Gene3D - 30 362 IPR040442 -
Phco6g00384 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g00384 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g00384 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g00384 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g00384 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g00384 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g00384 527 NCBIfam pyruvate kinase 30 516 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco6g00384 527 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Phco6g00384 527 SUPERFAMILY PK beta-barrel domain-like 96 187 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00384 Phco-Chr6 3646333 3659403 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02120 2 51970957 51981636 Phco6g00384 6 3646333 3659403 ECH
Phco6g00384 6 3646333 3659403 Phco6g00384 6 3646333 3659403 ECH