Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02120 ATGCTGTTAATTGCTGTTCTTAATTCTCTTAAATCAATGGCAACCCAAGCGAGGATGCATTCCGGTCACTTACTTCTCGAGGAACCCATTCGTATGGTTTCCATCCTCAAACCATCCAAGGCAAGTTTCTTTCCCGCAATGACGAAGATCGTTGGTACGCTCGGTCCCAAATCTCGATCGGTCGAGATTATTTCTGCATGCCTTAATGCTGGAATGTCAGTGGCTCGTTTCGACTTCTCTTGGTGCGATCCTGAATATCACCAAGAGACTTTGGAGAATTTGAAAACCGCTATCAAATCTACTAAGAAACTCTGTGCTGTAATGCTGGACACGGTGGGAGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAATCTATCTCGCTGCAGGCTGATGCTCAGGTTGTTCTGACTCCTGACCGGGGACAAGAAGCATCTTCACAGATACTGCCTATCAATTATGATGGACTGGCAAAGTCAATGAAGAAGGGAGACACAATTTTTGTTGGTCAATACTTGTTCACGGGAAGTGAAACTACTTCTGTATGGCTAGAGGTCTCCGAAGTTACAGGTCAGGATGTTGTTTGTACTATAAAGAATTCAGCAACATTAGCAGGGTCATTGTTCACTTTGCATGCCTCTCAGGTTCATATTGATTTGCCTACCCTCAGTGATAAAGACAAGGAGGTTATAAGCACCTGGGGAGTAAAAAACAAAATTGATTTTCTGTCATTGTCATATACTAGGCATGCTGAAGATGTTCGCCAGGCCCGTGAATTCCTTTCTAAGTTAGGAGATCTAAGCCAGACTCATATATTTGCAAAGATTGAAAATGTTGAGGGATTGACCCATTTTGATGAAATTCTACAAGAAGCAGATGGTATTATTCTTTCCCGTGGGAATTTGGGCATTGATCTTCCCCCAGAGAAGGTATTTTTCTTTCAAAAGTCTGCCCTTTACAAGTGTAATATGGCTGGGAAACCTTCTGTGCTTACACGTGTTGTGGATAGCATGACTGACAACTTAAGACCAACTCGTGCAGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGGAGTGATGCAATACTTCTAGGTGCTGAGACTTTGCGTGGGTTATACCCTGTTGAAACTATTTCTACAGTTGGAAAAATTTGTGCAGAAGCTGAGAAAGTTTTTAATCAAGACCGTTATTTTAAGAGAACTGTCAAATATGTTGGAGAACCCATGTCCCACTTGGAATCTATTGCCTCCTCTGCGGTACGAGCAGCTATTAAGGTGAAGGCTTCTGTTATTATTTGCTTCACTTCATCTGGAAGGGCCGCAAGATTGATAGCAAAATATAGGCCAACCATGCCAGTTCTCTCTGTTGTGATCCCCCGACTCAAGACAAATCAGCTGAAATGGAGCTTTAGCGGAGCTTTTGAGGCTAGGCAATCACTTATTGTAAGAGGTCTCTTTCCCATACTTGCCGATCCTCGACATCCAGCCGAGTCAACTAGTGCCTCAAACGAGTCTATTCTAAAGGTTGCCCTTGATCATGGAAAAGCAGCAGGAGTTATAAAGTCGCACGATCGTGTAGTTGTTTGCCAGAAAGTTGGTGATTCAGCTGTGGTTAAGATTATCGAGCTTGAAGATTAA 1638 0.4298 MLLIAVLNSLKSMATQARMHSGHLLLEEPIRMVSILKPSKASFFPAMTKIVGTLGPKSRSVEIISACLNAGMSVARFDFSWCDPEYHQETLENLKTAIKSTKKLCAVMLDTVGAEMQVVNKSEKSISLQADAQVVLTPDRGQEASSQILPINYDGLAKSMKKGDTIFVGQYLFTGSETTSVWLEVSEVTGQDVVCTIKNSATLAGSLFTLHASQVHIDLPTLSDKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTHIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFFFQKSALYKCNMAGKPSVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEAEKVFNQDRYFKRTVKYVGEPMSHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPILADPRHPAESTSASNESILKVALDHGKAAGVIKSHDRVVVCQKVGDSAVVKIIELED 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02120 545 Pfam Pyruvate kinase, alpha/beta domain 413 533 IPR015795 -
Phco2g02120 545 Pfam Pyruvate kinase, barrel domain 48 394 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco2g02120 545 SUPERFAMILY PK beta-barrel domain-like 121 204 IPR011037 -
Phco2g02120 545 SUPERFAMILY PK C-terminal domain-like 376 532 IPR036918 -
Phco2g02120 545 Gene3D - 48 388 IPR040442 -
Phco2g02120 545 Gene3D - 389 531 IPR036918 -
Phco2g02120 545 PANTHER PYRUVATE KINASE 43 530 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco2g02120 545 FunFam Pyruvate kinase 114 220 - -
Phco2g02120 545 NCBIfam pyruvate kinase 48 533 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco2g02120 545 Gene3D - 114 220 IPR015806 GO:0004743|GO:0006096
Phco2g02120 545 FunFam Pyruvate kinase 389 531 - -
Phco2g02120 545 PRINTS Pyruvate kinase family signature 347 365 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco2g02120 545 PRINTS Pyruvate kinase family signature 103 119 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco2g02120 545 PRINTS Pyruvate kinase family signature 298 322 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco2g02120 545 PRINTS Pyruvate kinase family signature 366 382 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco2g02120 545 PRINTS Pyruvate kinase family signature 271 297 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco2g02120 545 PRINTS Pyruvate kinase family signature 239 253 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Phco2g02120 545 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 23 397 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02120 Phco-Chr2 51970957 51981636 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02120 2 51970957 51981636 Phco2g02120 2 51970957 51981636 ECH
Phco2g02120 2 51970957 51981636 Phco6g00384 6 3646333 3659403 ECH
Phco2g02120 2 51970957 51981636 Phco6g00595 6 5850991 5859186 PCT