Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00342 ATGGATCATATAAGCAACGAGGCTAGTGTTGTCAATTTTGCGATTGGCCCTTCTAGCATTCTGGGCAGGACTATTGCTTTCAGGGTTCTGTTCTGCAAGTCTATCTTAAAATTGAGATATCAGATTCGTTTTGTGTTGTTGGATATCTTCCATGGTTTTAGGGGATTTTGGGGACCCATTTTGTCATGGTTGCACCCAAGAAATCCGCAGGGGATATTGGCAATGATGACTATAGTTGCTTTCTTGTTGAAACGGTACACCAATGTGAAGGTGAGGGCTGAGATGGTATATAGGCGGAAATTTTGGAGAAATATGATGAGATCTGCATTGACCTATGAGGAGTGGGCTCATGCAGCCAAAATGCTTGATAGAGAGACACCAAAGACGAATGAATCACACCTTTATGATGTGGAGCTGGTGAGTAACAAGCTTGAAGAGCTTCGCCAACGCCGGCAAGAGGGGTCTCTTAGGGATATAATATTTTGTATGCGTGCTGATCTTGTTAGAAATCTTGGTAACATGTGTAACCCTGAACTTCACAAAGGTAGGCTTCAAATGCCAAGACTAATCAAGGAGTATATTGACGAGGTATCAACTCAGTTGAGAATGGTCTGCAACTCTGATTCGGAGGAGCTTGCATTGGAAGAAAAGCTTTCTTTCATGCATGAAACTAGACATGCATTTGGGAGGACTGCTTTGTTGTTAAGTGGTGGTGCTTCCCTTGGAGCTTTTCATGTTGGTGTGGTTAAAACACTGGTAGAACATAAACTTATGCCGAGGATAATTGCTGGTTCCAGTGTAGGATCCATTATGTGCTCCATTGTTGCCACTAGGGCTTGGCCTGAGCTTCGAAGCTTTTTTGAGGATTCATTGCAGTCATTACAGTTTTTTGATCAATTAGGTGGGATTTTTACAGTTGTGAAGAGGGTCACAACATATGGTGCAGTTCACGAGATCAGACATTTGCAAATGATGCTGAGGAATCTAACAAGCAATCTTACATTTCAAGAAGCATATGATATGACGGGTCGAGTTCTTGGGATTACAGTCTGTTCCCCAAGAAAGCATGAACCACCTAGATGTCTTAACTACTTGACTTCACCTCATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGTCTTTTCGAGGCTCAGGAATTAATGGCAAAGGATAGAAGTGGAGATATTGTTCCTTACCACCCTCCTTTTAACTTGGGTCCTGAAAAGGGTTCCACTCCTGTGCGCCGTTGGAGGGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAGCTGTTCAACGTCAACCATTTTATAGTTAGTCAGGCCAATCCTCATATTGCACCATTGTTGAGATTGAAAGAATTTATACGAGCTTATGGAGGTAATTTTGCAGCAAAGCTTGCTCATCTAGTAGAGATGGAGGTGAAACATAGATGTAATCAAGTACTGGAGCTCGGCTTTCCATTAGGTGGACTTGCCAAACTGTTTGCTCAAGACTGGGAGGGTGATGTAACAGTTGTTATGCCTGCAACTCTGTCTCAGTACTTAAAAATCATACAGAACCCTTCTTATGTAGAACTTCAAAAGGCAGCTAACCAAGGGAGAAGAGGCACTTGGGAGAAGCTTTCTGCCATAAAAGCAAACTGTGGAATTGAGCTTGCTCTTGATGAGTCTGTTGCAATTCTCAATCATATGAGACGTCTTAAAAGAAGTGCCGAGAGAGCTGCTGCTGCTGCTTCTCATGGTCTGCCCAATATAGTCAAATTCAGTGGTCCAAGAAGAATTCCCTCGTGGAATGTCATTGCTCGAGAGAATTCTACAGGATCCCTAGAAGACCTTCATGCAGATGCTGCTTCCTCATTGCATCAAGGTCTTAATAGTCCTAGTGGAGCCACTGGTAAAAATTGGAAGTCCCATCGTGGCATTCATGAGGCAAGTGACAGTGAATCTGAAAGTGCTGACTTGAATTCTTGGACCAGATCCGGTGGGCCTTTGATGAGAACTACATCAGCAGATATGTTCATTGACTTTGTCGAAAACTTAGAAGTTGATACTGAACTAAATAGAAGCAAGGTGACTCAGACTAGCCCTCGTGATTTTCAGCATCACAGTTCAAGGCACACAACTCCTGATAAGTGCTCCGAGGGCACAGATCAGAAAGAAAATGGCAACAGGGTTGTCATGAATGGATCTAACATAATGGTAACTGAAGGTGATCTTTTGCAGCCTGGAAGGATCCATAATGGGATTGTATTTAATGTTGTCAAGAAAGAAGACTTGACACCTTCACATAGGAATCATGATTATAATAGTTGTAACAATGCTGTGGTTGAATGTGTACAAATTGACTTTCCAGGGAAGGAGATGGATGCTTCTAGCTCAGCTTCTGAAAATGGTGATGAGGAATCAACAATGTTCAGTTCTTCAACTGATATACTAGATCATAATTCCACAGAACAGTCCAGGACAGATTTGGGTAAGGATCAAAGCATTGCTGACAGTTAA 2526 0.4244 MDHISNEASVVNFAIGPSSILGRTIAFRVLFCKSILKLRYQIRFVLLDIFHGFRGFWGPILSWLHPRNPQGILAMMTIVAFLLKRYTNVKVRAEMVYRRKFWRNMMRSALTYEEWAHAAKMLDRETPKTNESHLYDVELVSNKLEELRQRRQEGSLRDIIFCMRADLVRNLGNMCNPELHKGRLQMPRLIKEYIDEVSTQLRMVCNSDSEELALEEKLSFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLMPRIIAGSSVGSIMCSIVATRAWPELRSFFEDSLQSLQFFDQLGGIFTVVKRVTTYGAVHEIRHLQMMLRNLTSNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGDIVPYHPPFNLGPEKGSTPVRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFIRAYGGNFAAKLAHLVEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATLSQYLKIIQNPSYVELQKAANQGRRGTWEKLSAIKANCGIELALDESVAILNHMRRLKRSAERAAAAASHGLPNIVKFSGPRRIPSWNVIARENSTGSLEDLHADAASSLHQGLNSPSGATGKNWKSHRGIHEASDSESESADLNSWTRSGGPLMRTTSADMFIDFVENLEVDTELNRSKVTQTSPRDFQHHSSRHTTPDKCSEGTDQKENGNRVVMNGSNIMVTEGDLLQPGRIHNGIVFNVVKKEDLTPSHRNHDYNSCNNAVVECVQIDFPGKEMDASSSASENGDEESTMFSSSTDILDHNSTEQSRTDLGKDQSIADS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00342 841 MobiDBLite consensus disorder prediction 695 730 - -
Phco6g00342 841 MobiDBLite consensus disorder prediction 626 666 - -
Phco6g00342 841 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 53 571 - -
Phco6g00342 841 CDD Pat_SDP1-like 163 570 - -
Phco6g00342 841 MobiDBLite consensus disorder prediction 627 641 - -
Phco6g00342 841 MobiDBLite consensus disorder prediction 707 726 - -
Phco6g00342 841 MobiDBLite consensus disorder prediction 795 841 - -
Phco6g00342 841 MobiDBLite consensus disorder prediction 824 841 - -
Phco6g00342 841 SUPERFAMILY FabD/lysophospholipase-like 229 574 IPR016035 -
Phco6g00342 841 Gene3D Cytosolic phospholipase A2 catalytic domain 230 311 - -
Phco6g00342 841 Gene3D Cytosolic phospholipase A2 catalytic domain 312 494 - -
Phco6g00342 841 Pfam Patatin-like phospholipase 233 424 IPR002641 GO:0006629
Phco6g00342 841 Pfam Domain of unknown function (DUF3336) 97 226 IPR021771 GO:0004806|GO:0006629
Phco6g00342 841 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Phco6g00342 841 MobiDBLite consensus disorder prediction 798 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00342 Phco-Chr6 3251577 3255152 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00342 6 3251577 3255152 Phco6g00342 6 3251577 3255152 ECH
Phco2g01469 2 44356571 44360830 Phco6g00342 6 3251577 3255152 PCT